RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 PCDHGB7Q9Y5F8 929 aa9.18□□□□□ -0.94
KARS-203ENST00000562875 MYH13Q9UKX3 1938 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 MYO5AQ9Y4I1 1855 aaKnown RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 PLCH1Q4KWH8 1693 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 GOLGA8BA8MQT2 603 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 CBFA2T2O43439 604 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 TNNT1P13805 278 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 IL2RBP14784 551 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 TFE3P19532 575 aaPredicted RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 CCT2P78371 535 aaKnown RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 CEBPZQ03701 1054 aaKnown RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 IFIT5Q13325 482 aaKnown RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 ADALQ6DHV7 355 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 ATG9AQ7Z3C6 839 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
KARS-203ENST00000562875 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 CCDC34Q96HJ3 373 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 PGBD1Q96JS3 809 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 BPIFA3Q9BQP9 254 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 PRDM11Q9NQV5 511 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 KRT82Q9NSB4 513 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 CGNQ9P2M7 1197 aaKnown RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
KARS-203ENST00000562875 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.17□□□□□ -0.94
KARS-203ENST00000562875 LRP6O75581 1613 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 ATRNO75882 1429 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 SALL1Q9NSC2 1324 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 KLF18A0A0U1RQI7 1052 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 KRBA1A5PL33 1030 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 PRC1O43663 620 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 MYO1BO43795 1136 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 TRIM37O94972 964 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 ALX3O95076 343 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 PCCAP05165 728 aaPredicted RBP9.16□□□□□ -0.94
KARS-203ENST00000562875 PDIA3P30101 505 aaKnown RBP9.16□□□□□ -0.94
KARS-203ENST00000562875 NRG1Q02297 640 aaPredicted RBP9.16□□□□□ -0.94
KARS-203ENST00000562875 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 EXOSC6Q5RKV6 272 aaKnown RBP9.16□□□□□ -0.94
KARS-203ENST00000562875 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 WASF1Q92558 559 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 JARID2Q92833 1246 aaPredicted RBP9.16□□□□□ -0.94
KARS-203ENST00000562875 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 RHOVQ96L33 236 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 NOL10Q9BSC4 688 aaKnown RBP9.16□□□□□ -0.94
KARS-203ENST00000562875 LRRC2Q9BYS8 371 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 PYCARDQ9ULZ3 195 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 PHLPP1O60346 1717 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 TIAM2Q8IVF5 1701 aa9.16□□□□□ -0.94
KARS-203ENST00000562875 COL5A2P05997 1499 aaPredicted RBP9.15□□□□□ -0.94
KARS-203ENST00000562875 CDHR2Q9BYE9 1310 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 ANKRD18BA2A2Z9 1011 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 SPTLC2O15270 562 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 ZNF862O60290 1169 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 STARD3NLO95772 234 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 PF4P02776 101 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 UQCRFS1P1P0C7P4 283 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
KARS-203ENST00000562875 PIP4K2AP48426 406 aaPredicted RBP9.15□□□□□ -0.94
KARS-203ENST00000562875 EVCP57679 992 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 EVA1CP58658 441 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 TIMM10P62072 90 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 LMNB2Q03252 620 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 KCNMA1Q12791 1236 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 TCIRG1Q13488 830 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 CAMK2GQ13555 558 aaPredicted RBP9.15□□□□□ -0.94
KARS-203ENST00000562875 SEPT6Q14141 434 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 PTPN14Q15678 1187 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 METTL24Q5JXM2 366 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 OLFM4Q6UX06 510 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 STOX1Q6ZVD7 989 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 WDR89Q96FK6 387 aaPredicted RBP9.15□□□□□ -0.94
KARS-203ENST00000562875 USP28Q96RU2 1077 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 PLA2G12BQ9BX93 195 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 TMPRSS13Q9BYE2 586 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 MIR1-1HGQ9H1L0 117 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 AKTIPQ9H8T0 292 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 RAD18Q9NS91 495 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 ORC3Q9UBD5 711 aaPredicted RBP9.15□□□□□ -0.94
KARS-203ENST00000562875 NHSL1Q5SYE7 1610 aa9.15□□□□□ -0.94
KARS-203ENST00000562875 COL14A1Q05707 1796 aaKnown RBP9.14□□□□□ -0.95
KARS-203ENST00000562875 ZMYM6O95789 1325 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 MEGF11A6BM72 1044 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 M0R2C6 588 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
KARS-203ENST00000562875 METAP2P50579 478 aaKnown RBP eCLIP9.14□□□□□ -0.95
KARS-203ENST00000562875 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
KARS-203ENST00000562875 RASSF7Q02833 373 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 MBTPS1Q14703 1052 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 SAFBQ15424 915 aaKnown RBP eCLIP9.14□□□□□ -0.95
KARS-203ENST00000562875 ATP2B3Q16720 1220 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 SCARA3Q6AZY7 606 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 LRRC8AQ8IWT6 810 aa9.14□□□□□ -0.95
KARS-203ENST00000562875 ZBTB38Q8NAP3 1195 aaPredicted RBP9.14□□□□□ -0.95
KARS-203ENST00000562875 WFDC12Q8WWY7 111 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms