RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PCDHA5Q9Y5H7 936 aa8□□□□□ -1.13
CDH1-203ENST00000561751 WASF2Q9Y6W5 498 aa8□□□□□ -1.13
CDH1-203ENST00000561751 BRWD3Q6RI45 1802 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 GRID2IPA4D2P6 1211 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 ZNF233A6NK53 670 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 GCOM1H8Y6P7 765 aaPredicted RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 CES2O00748 559 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 SH2B2O14492 632 aaPredicted RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 SKAP2O75563 359 aaPredicted RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 ATP5HO75947 161 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 CTDNEP1O95476 244 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 LMNAP02545 664 aaKnown RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 MYL1P05976 194 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 PYGLP06737 847 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 MYZAPP0CAP1 466 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 NQO1P15559 274 aaKnown RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 ACADSP16219 412 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 DRD4P21917 467 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 RANBP1P43487 201 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 EIF3BP55884 814 aaKnown RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 MXRA7P84157 204 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 GUCY1A3Q02108 690 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 FLIIQ13045 1269 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 MTF1Q14872 753 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 MEA1Q16626 185 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 SKIDA1Q1XH10 827 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 CCDC152Q4G0S7 254 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 ANKRD20A2Q5SQ80 823 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 ANKRD20A1Q5TYW2 823 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 ANKRD20A3Q5VUR7 823 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 ARHGAP27Q6ZUM4 889 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 CCDC80Q76M96 950 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 MYLK4Q86YV6 388 aaPredicted RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 CREG2Q8IUH2 290 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 LSM14AQ8ND56 463 aaKnown RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 SPATA4Q8NEY3 305 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 KLHDC4Q8TBB5 520 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 CABLES1Q8TDN4 633 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 MAIP1Q8WWC4 291 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 RSPH1Q8WYR4 309 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 SMC6Q96SB8 1091 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 DNAJC7Q99615 494 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 OSBPL1AQ9BXW6 950 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 BHMT2Q9H2M3 363 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 DNAAF2Q9NVR5 837 aaKnown RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 CABP1Q9NZU7 370 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 LARSQ9P2J5 1176 aaKnown RBP7.99□□□□□ -1.13
CDH1-203ENST00000561751 PDP2Q9P2J9 529 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 SNX12Q9UMY4 172 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 ZNF510Q9Y2H8 683 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 DLG5Q8TDM6 1919 aa7.99□□□□□ -1.13
CDH1-203ENST00000561751 NRKQ7Z2Y5 1582 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 EDC4Q6P2E9 1401 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 WIPF1O43516 503 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CEP104O60308 925 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 DIAPH2O60879 1101 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 TACC1O75410 805 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 F12P00748 615 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 HOXB7P09629 217 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CPA3P15088 417 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 ZFXP17010 805 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 RPL13P26373 211 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 CLCN2P51788 898 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 RAB15P59190 212 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 PPP2R2AP63151 447 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 LACTBP83111 547 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 ATP11AP98196 1134 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CEBPZQ03701 1054 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 KLC1Q07866 573 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 NMIQ13287 307 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 CUL1Q13616 776 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CUL4BQ13620 913 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 BYSLQ13895 437 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 PARP6Q2NL67 630 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 SPDYAQ5MJ70 313 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 SLC4A10Q6U841 1118 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CPLX4Q7Z7G2 160 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 METTL16Q86W50 562 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 RNF168Q8IYW5 571 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 ALDH16A1Q8IZ83 802 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CAGE1Q8TC20 777 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 AGAP11Q8TF27 550 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 GFM2Q969S9 779 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 CCDC97Q96F63 343 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 IFT43Q96FT9 208 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 CHMP6Q96FZ7 201 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 RAB3IPQ96QF0 476 aaPredicted RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 PYM1Q9BRP8 204 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 DSCC1Q9BVC3 393 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 NSRP1Q9H0G5 558 aaKnown RBP7.98□□□□□ -1.13
CDH1-203ENST00000561751 RAB17Q9H0T7 212 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 IL1RAPL2Q9NP60 686 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 ARHGEF3Q9NR81 526 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDH1-203ENST00000561751 MAP10Q9P2G4 905 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 MAN1B1Q9UKM7 699 aa7.98□□□□□ -1.13
CDH1-203ENST00000561751 ZNF148Q9UQR1 794 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms