RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 FIBPO43427 364 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 GGPS1O95749 300 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 MYL3P08590 195 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 XBP1P17861 261 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 ARHGAP4P98171 946 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 KCNV1Q6PIU1 500 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 CXCL17Q6UXB2 119 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 DHX37Q8IY37 1157 aaKnown RBP26.71■■□□□ 1.87
SMPD3-202ENST00000561749 AFG1LQ8WV93 481 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 TMX3Q96JJ7 454 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 PHF20Q9BVI0 1012 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 BCAS3Q9H6U6 928 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 PKD2L1Q9P0L9 805 aa26.71■■□□□ 1.87
SMPD3-202ENST00000561749 SPATA31C2B4DYI2 1134 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 ZEB2O60315 1214 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 ICAM3P32942 547 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 CPT1AP50416 773 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 SLC39A5Q6ZMH5 540 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 CYP2W1Q8TAV3 490 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 VTI1AQ96AJ9 217 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 STARD7Q9NQZ5 370 aa26.7■■□□□ 1.86
SMPD3-202ENST00000561749 ZNF76P36508 570 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 MCTP2Q6DN12 878 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 C7orf61Q8IZ16 206 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 DAGLBQ8NCG7 672 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 GPRASP2Q96D09 838 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 GLT1D1Q96MS3 346 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 MXRA8Q9BRK3 442 aa26.69■■□□□ 1.86
SMPD3-202ENST00000561749 LLPHQ9BRT6 129 aaKnown RBP26.69■■□□□ 1.86
SMPD3-202ENST00000561749 EVI5O60447 810 aa26.68■■□□□ 1.86
SMPD3-202ENST00000561749 TGFB3P10600 412 aa26.68■■□□□ 1.86
SMPD3-202ENST00000561749 RTP1P59025 263 aa26.68■■□□□ 1.86
SMPD3-202ENST00000561749 MTMR1Q13613 665 aa26.68■■□□□ 1.86
SMPD3-202ENST00000561749 CELF3Q5SZQ8 465 aaKnown RBP26.68■■□□□ 1.86
SMPD3-202ENST00000561749 FAM177A1Q8N128 213 aaPredicted RBP26.68■■□□□ 1.86
SMPD3-202ENST00000561749 JADE2Q9NQC1 790 aa26.68■■□□□ 1.86
SMPD3-202ENST00000561749 ATP11BQ9Y2G3 1177 aa26.68■■□□□ 1.86
SMPD3-202ENST00000561749 TNRC18O15417 2968 aaPredicted RBP26.68■■□□□ 1.86
SMPD3-202ENST00000561749 A6NJR5 290 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 M0R2N6 131 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 MMP3P08254 477 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 MCM2P49736 904 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 LAMC2Q13753 1193 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 TRIM60Q495X7 471 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 BRDTQ58F21 947 aaPredicted RBP26.67■■□□□ 1.86
SMPD3-202ENST00000561749 MYSM1Q5VVJ2 828 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 GALNT17Q6IS24 598 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 IL27Q8NEV9 243 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 OXER1Q8TDS5 423 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 CRYGNQ8WXF5 182 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 MLXIPQ9HAP2 919 aa26.67■■□□□ 1.86
SMPD3-202ENST00000561749 MKI67P46013 3256 aaKnown RBP26.67■■□□□ 1.86
SMPD3-202ENST00000561749 ATP9AO75110 1047 aa26.66■■□□□ 1.86
SMPD3-202ENST00000561749 PSMC6P62333 389 aa26.66■■□□□ 1.86
SMPD3-202ENST00000561749 CYFIP1Q7L576 1253 aa26.66■■□□□ 1.86
SMPD3-202ENST00000561749 SPATA33Q96N06 139 aa26.66■■□□□ 1.86
SMPD3-202ENST00000561749 POLR3EQ9NVU0 708 aa26.66■■□□□ 1.86
SMPD3-202ENST00000561749 CYP3A4P08684 503 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 ARP10275 920 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 PURAQ00577 322 aaKnown RBP26.65■■□□□ 1.86
SMPD3-202ENST00000561749 GUCY1B3Q02153 619 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 SP4Q02446 784 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 CEP55Q53EZ4 464 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 TBCKQ8TEA7 893 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 PPP1R13LQ8WUF5 828 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 EMID1Q96A84 441 aaPredicted RBP26.65■■□□□ 1.86
SMPD3-202ENST00000561749 UIMC1Q96RL1 719 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 PCDH10Q9P2E7 1040 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 TELO2Q9Y4R8 837 aa26.65■■□□□ 1.86
SMPD3-202ENST00000561749 SCN10AQ9Y5Y9 1956 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 FAM86B1E9PN63 330 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 FAM86B2P0C5J1 330 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 KCNA2P16389 499 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 HMGN5P82970 282 aaKnown RBP26.64■■□□□ 1.86
SMPD3-202ENST00000561749 TRIM29Q14134 588 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 NEDD9Q14511 834 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 SNX17Q15036 470 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 HSDL1Q3SXM5 330 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 KRT40Q6A162 431 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 PLA2G4DQ86XP0 818 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 PPTC7Q8NI37 304 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 CDHR1Q96JP9 859 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 KCNH7Q9NS40 1196 aa26.64■■□□□ 1.86
SMPD3-202ENST00000561749 ELP1O95163 1332 aa26.64■■□□□ 1.85
SMPD3-202ENST00000561749 A0A0U1RQG5 324 aaPredicted RBP26.63■■□□□ 1.85
SMPD3-202ENST00000561749 CABYRO75952 493 aa26.63■■□□□ 1.85
SMPD3-202ENST00000561749 CHMP4BP1P59074 171 aa26.63■■□□□ 1.85
SMPD3-202ENST00000561749 KRT25Q7Z3Z0 450 aa26.63■■□□□ 1.85
SMPD3-202ENST00000561749 FAM184AQ8NB25 1140 aa26.63■■□□□ 1.85
SMPD3-202ENST00000561749 MTG1Q9BT17 334 aaPredicted RBP26.63■■□□□ 1.85
SMPD3-202ENST00000561749 CCDC194A0A1B0GVG4 234 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 MEIS1O00470 390 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 EDIL3O43854 480 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 ZNF286BP0CG31 522 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 KRT2P35908 639 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 NR5A1Q13285 461 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 NONOQ15233 471 aaKnown RBP eCLIP26.62■■□□□ 1.85
SMPD3-202ENST00000561749 INF2Q27J81 1249 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 METTL7BQ6UX53 244 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 C8orf76Q96K31 380 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms