RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ADHFE1Q8IWW8 467 aa21.35■■□□□ 1.01
COMMD4-204ENST00000561662 TMEM192Q8IY95 271 aa21.35■■□□□ 1.01
COMMD4-204ENST00000561662 SP7Q8TDD2 431 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-204ENST00000561662 DCTPP1Q9H773 170 aa21.35■■□□□ 1.01
COMMD4-204ENST00000561662 DDX41Q9UJV9 622 aaKnown RBP21.35■■□□□ 1.01
COMMD4-204ENST00000561662 ANAPC4Q9UJX5 808 aa21.35■■□□□ 1.01
COMMD4-204ENST00000561662 ZNF318Q5VUA4 2279 aa21.35■■□□□ 1.01
COMMD4-204ENST00000561662 MICAL3Q7RTP6 2002 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 C19orf67A6NJJ6 358 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 RSPH10B2B2RC85 870 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 RSPH10BP0C881 870 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 EIF2AK2P19525 551 aaKnown RBP21.34■■□□□ 1.01
COMMD4-204ENST00000561662 MKRN4PQ13434 485 aaPredicted RBP21.34■■□□□ 1.01
COMMD4-204ENST00000561662 STXBP2Q15833 593 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 RPAINQ86UA6 219 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 NSUN6Q8TEA1 469 aaKnown RBP21.34■■□□□ 1.01
COMMD4-204ENST00000561662 RMDN3Q96TC7 470 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 KATNAL1Q9BW62 490 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 NSUN3Q9H649 340 aaKnown RBP21.34■■□□□ 1.01
COMMD4-204ENST00000561662 MRVI1Q9Y6F6 885 aa21.34■■□□□ 1.01
COMMD4-204ENST00000561662 HAS3O00219 553 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 F2P00734 622 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 CTSHP09668 335 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 LTBRP36941 435 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 HAND2P61296 217 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 DLX2Q07687 328 aaPredicted RBP21.33■■□□□ 1.01
COMMD4-204ENST00000561662 B4GALNT3Q6L9W6 998 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 PRKAG3Q9UGI9 489 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 PNMA2Q9UL42 364 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 FAM50BQ9Y247 325 aa21.33■■□□□ 1.01
COMMD4-204ENST00000561662 USP34Q70CQ2 3546 aa21.32■■□□□ 1
COMMD4-204ENST00000561662 FGRP09769 529 aa21.32■■□□□ 1
COMMD4-204ENST00000561662 CDC37Q16543 378 aaPredicted RBP21.32■■□□□ 1
COMMD4-204ENST00000561662 ARHGEF16Q5VV41 709 aa21.32■■□□□ 1
COMMD4-204ENST00000561662 FBXO11Q86XK2 927 aa21.32■■□□□ 1
COMMD4-204ENST00000561662 ZKSCAN3Q9BRR0 538 aa21.32■■□□□ 1
COMMD4-204ENST00000561662 KCNH6Q9H252 994 aa21.32■■□□□ 1
COMMD4-204ENST00000561662 EMSYQ7Z589 1322 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 PLEKHG4Q58EX7 1191 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 RGS22Q8NE09 1264 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 PRSS33Q8NF86 280 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 PPTC7Q8NI37 304 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 MFSD14AQ96MC6 490 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 RWDD1Q9H446 243 aaPredicted RBP21.31■■□□□ 1
COMMD4-204ENST00000561662 TCP11L1Q9NUJ3 509 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 KIAA1217Q5T5P2 1943 aa21.31■■□□□ 1
COMMD4-204ENST00000561662 TTC41PQ6P2S7 1318 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 FGAP02671 866 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 SNHG28P0DPA3 235 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 GTF2F1P35269 517 aaKnown RBP eCLIP21.3■■□□□ 14e-9■■■■■ 28.7
COMMD4-204ENST00000561662 LAMC2Q13753 1193 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 COL19A1Q14993 1142 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 IER5LQ5T953 404 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 ZFP91Q96JP5 570 aaPredicted RBP21.3■■□□□ 1
COMMD4-204ENST00000561662 SAMD11Q96NU1 681 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
COMMD4-204ENST00000561662 IGFLR1Q9H665 355 aa21.3■■□□□ 1
COMMD4-204ENST00000561662 MYH7BA7E2Y1 1941 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.29■■□□□ 1
COMMD4-204ENST00000561662 CTNNB1P35222 781 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 HSDL1Q3SXM5 330 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 SERINC5Q86VE9 423 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 RNF135Q8IUD6 432 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 SEPT8Q92599 483 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 ATP6V0A1Q93050 837 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 TOP1MTQ969P6 601 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 EMID1Q96A84 441 aaPredicted RBP21.29■■□□□ 1
COMMD4-204ENST00000561662 SPATA33Q96N06 139 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 IWS1Q96ST2 819 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 IFIH1Q9BYX4 1025 aaKnown RBP21.29■■□□□ 1
COMMD4-204ENST00000561662 TECTAO75443 2155 aa21.29■■□□□ 1
COMMD4-204ENST00000561662 NR3C2P08235 984 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 MYCLP12524 364 aaPredicted RBP21.28■■□□□ 1
COMMD4-204ENST00000561662 HYAL1Q12794 435 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 SMAD2Q15796 467 aaKnown RBP21.28■■□□□ 1
COMMD4-204ENST00000561662 SMC5Q8IY18 1101 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 VAT1LQ9HCJ6 419 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 PXMP2Q9NR77 195 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 NLRC5Q86WI3 1866 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 ABCB11O95342 1321 aa21.28■■□□□ 1
COMMD4-204ENST00000561662 GRM6O15303 877 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 LINC01565O15544 149 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 TREHO43280 583 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 MBTPS2O43462 519 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 EIF3JO75822 258 aaKnown RBP21.27■■□□□ 1
COMMD4-204ENST00000561662 CFBP00751 764 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 ADGRF4Q8IZF3 695 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 FAM227BQ96M60 508 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 ATG2AQ2TAZ0 1938 aa21.27■■□□□ 1
COMMD4-204ENST00000561662 CFAP54Q96N23 3096 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 C17orf102A2RUQ5 167 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 DHX16O60231 1041 aaKnown RBP21.26■□□□□ 0.99
COMMD4-204ENST00000561662 TBX10O75333 385 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 RGS20O76081 388 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 GGPS1O95749 300 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 ALX1Q15699 326 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 QRICH1Q2TAL8 776 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 HERC4Q5GLZ8 1057 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-204ENST00000561662 MYSM1Q5VVJ2 828 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms