RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 HAS3O00219 553 aa23.75■■□□□ 1.39
TPM1-232ENST00000561425 METAP2P50579 478 aaKnown RBP eCLIP23.75■■□□□ 1.39
TPM1-232ENST00000561425 FGD1P98174 961 aa23.75■■□□□ 1.39
TPM1-232ENST00000561425 HSDL1Q3SXM5 330 aa23.75■■□□□ 1.39
TPM1-232ENST00000561425 GNPTABQ3T906 1256 aa23.75■■□□□ 1.39
TPM1-232ENST00000561425 RIC8AQ9NPQ8 531 aa23.75■■□□□ 1.39
TPM1-232ENST00000561425 TRMT13Q9NUP7 481 aaKnown RBP23.75■■□□□ 1.39
TPM1-232ENST00000561425 BARHL2Q9NY43 387 aa23.75■■□□□ 1.39
TPM1-232ENST00000561425 SZT2Q5T011 3432 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 STXBP3O00186 592 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 FIBPO43427 364 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 GGPS1O95749 300 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 TOB2Q14106 344 aaPredicted RBP23.74■■□□□ 1.39
TPM1-232ENST00000561425 NTRK3Q16288 839 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 TMEM199Q8N511 208 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 SENP7Q9BQF6 1050 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 HIPK3Q9H422 1215 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 BCAS3Q9H6U6 928 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 RTEL1Q9NZ71 1219 aa23.74■■□□□ 1.39
TPM1-232ENST00000561425 F2P00734 622 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PDIA3P30101 505 aaKnown RBP23.73■■□□□ 1.39
TPM1-232ENST00000561425 CYP2C18P33260 490 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PPIGQ13427 754 aaKnown RBP eCLIP23.73■■□□□ 1.393e-7■■■□□ 17.9
TPM1-232ENST00000561425 UBE2SQ16763 222 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PFKFB3Q16875 520 aaPredicted RBP23.73■■□□□ 1.39
TPM1-232ENST00000561425 VWCEQ96DN2 955 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 IL17RAQ96F46 866 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 CTAGE1Q96RT6 745 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PPP1R12CQ9BZL4 782 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PCDHA6Q9UN73 950 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PCDHA8Q9Y5H6 950 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 UMODL1Q5DID0 1318 aa23.73■■□□□ 1.39
TPM1-232ENST00000561425 PRPF3O43395 683 aaKnown RBP23.72■■□□□ 1.39
TPM1-232ENST00000561425 CSF2RAP15509 400 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 CLK2P49760 499 aaKnown RBP23.72■■□□□ 1.39
TPM1-232ENST00000561425 NEDD9Q14511 834 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 PKN1Q16512 942 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 RASIP1Q5U651 963 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 SPATA33Q96N06 139 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 C16orf70Q9BSU1 422 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 WNT8AQ9H1J5 351 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 UBIAD1Q9Y5Z9 338 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 CYP46A1Q9Y6A2 500 aa23.72■■□□□ 1.39
TPM1-232ENST00000561425 ITGB5P18084 799 aa23.71■■□□□ 1.39
TPM1-232ENST00000561425 TMEM240Q5SV17 173 aa23.71■■□□□ 1.39
TPM1-232ENST00000561425 FAM109BQ6ICB4 259 aaPredicted RBP23.71■■□□□ 1.39
TPM1-232ENST00000561425 METTL7BQ6UX53 244 aa23.71■■□□□ 1.39
TPM1-232ENST00000561425 GPRASP2Q96D09 838 aa23.71■■□□□ 1.39
TPM1-232ENST00000561425 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.71■■□□□ 1.393e-7■■■□□ 16.1
TPM1-232ENST00000561425 SMCO2A6NFE2 343 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 SPDYE3A6NKU9 549 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 FOSP01100 380 aaPredicted RBP23.7■■□□□ 1.38
TPM1-232ENST00000561425 CYP2C9P11712 490 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 NAPAP54920 295 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 NLRX1Q86UT6 975 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 PPP1R13LQ8WUF5 828 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 ZNF274Q96GC6 653 aaPredicted RBP23.7■■□□□ 1.38
TPM1-232ENST00000561425 KATNAL1Q9BW62 490 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 GLT8D2Q9H1C3 349 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 MLXIPQ9HAP2 919 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 IL23AQ9NPF7 189 aa23.7■■□□□ 1.38
TPM1-232ENST00000561425 ESYT2A0FGR8 921 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 MAFGO15525 162 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 SCG2P13521 617 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 IFNAR1P17181 557 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 PSEN2P49810 448 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 SMAD3P84022 425 aaKnown RBP23.69■■□□□ 1.38
TPM1-232ENST00000561425 FAM47CQ5HY64 1035 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 GTF2IRD1Q9UHL9 959 aa23.69■■□□□ 1.38
TPM1-232ENST00000561425 NAP1L2Q9ULW6 460 aaPredicted RBP23.69■■□□□ 1.38
TPM1-232ENST00000561425 PITPNM1O00562 1244 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 ADCY7P51828 1080 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 ANAPC15P60006 121 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 MFSD10Q14728 455 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 GDF6Q6KF10 455 aaPredicted RBP23.68■■□□□ 1.38
TPM1-232ENST00000561425 GIMAP8Q8ND71 665 aaPredicted RBP23.68■■□□□ 1.38
TPM1-232ENST00000561425 CDHR1Q96JP9 859 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 GPR20Q99678 358 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 RNF26Q9BY78 433 aaPredicted RBP23.68■■□□□ 1.38
TPM1-232ENST00000561425 ZMYND12Q9H0C1 365 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 JADE2Q9NQC1 790 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 HDAC6Q9UBN7 1215 aa23.68■■□□□ 1.38
TPM1-232ENST00000561425 ATP9AO75110 1047 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 ZNF286BP0CG31 522 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 KCNA2P16389 499 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 HOXC8P31273 242 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 CCL23P55773 120 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 RBL2Q08999 1139 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 AP3B2Q13367 1082 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 KIAA0753Q2KHM9 967 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 ZNF365Q70YC5 407 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 CYFIP1Q7L576 1253 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 CRYGNQ8WXF5 182 aa23.67■■□□□ 1.38
TPM1-232ENST00000561425 RNPC3Q96LT9 517 aaKnown RBP23.67■■□□□ 1.38
TPM1-232ENST00000561425 UPF3BQ9BZI7 483 aaKnown RBP23.67■■□□□ 1.38
TPM1-232ENST00000561425 ACRP10323 421 aa23.66■■□□□ 1.38
TPM1-232ENST00000561425 PTGISQ16647 500 aa23.66■■□□□ 1.38
TPM1-232ENST00000561425 PSRC1Q6PGN9 363 aaPredicted RBP23.66■■□□□ 1.38
TPM1-232ENST00000561425 HERVK_113Q902F9 699 aa23.66■■□□□ 1.38
TPM1-232ENST00000561425 EHMT1Q9H9B1 1298 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms