RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SLF1Q9BQI6 1058 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 UBA5Q9GZZ9 404 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 RMND1Q9NWS8 449 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 SWAP70Q9UH65 585 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 GUCA1BQ9UMX6 200 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 CTNND2Q9UQB3 1225 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 FRMPD2Q68DX3 1309 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 MYO3BQ8WXR4 1341 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 ESYT2A0FGR8 921 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 LRRC10BA6NIK2 292 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 PP2D1A8MPX8 630 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 ABL1P00519 1130 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 RPN1P04843 607 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 SLC8A1P32418 973 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 SLC8A3P57103 927 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 ASPRV1Q53RT3 343 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 NAALADL2Q58DX5 795 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 RRAGBQ5VZM2 374 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 HHIPL2Q6UWX4 724 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 CCDC13Q8IYE1 715 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 FLAD1Q8NFF5 587 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 NUP88Q99567 741 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 SERPINB13Q9UIV8 391 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 KRT86O43790 486 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 APBA3O96018 575 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 ZNF658Q5TYW1 1059 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 LRRC47Q8N1G4 583 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 ZNF473Q8WTR7 871 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 SLC40A1Q9NP59 571 aa15.42■□□□□ 0.06
RABGGTA-220ENST00000560998 GREB1LQ9C091 1923 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 hCG_1984214I3L0E3 225 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 OR52Z1P0C646 297 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 LSP1P33241 339 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 SHMT1P34896 483 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 UBA7P41226 1012 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 PDCLQ13371 301 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 TTMPQ5BVD1 217 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 APOBEC3HQ6NTF7 200 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 NEK8Q86SG6 692 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 GSPT2Q8IYD1 628 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 ZNF713Q8N859 430 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 TEKT1Q969V4 418 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 TMX4Q9H1E5 349 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 RWDD2AQ9UIY3 292 aa15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 REXO2Q9Y3B8 237 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-220ENST00000560998 G3V3G9 751 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 CCNT1O60563 726 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 NEBLO76041 1014 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 TTLL1O95922 423 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 KRT9P35527 623 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 LETM2Q2VYF4 491 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 DCAF8Q5TAQ9 597 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 PARP9Q8IXQ6 854 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 AK8Q96MA6 479 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 HDAC6Q9UBN7 1215 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 RTN2O75298 545 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 PPP1R37O75864 691 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 EIF6P56537 245 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 MAP2K1Q02750 393 aaPredicted RBP15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 PAK1Q13153 545 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 PTGISQ16647 500 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 CCDC122Q5T0U0 273 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 REXO1Q8N1G1 1221 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 P3H4Q92791 437 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 KBTBD4Q9NVX7 518 aa15.4■□□□□ 0.06
RABGGTA-220ENST00000560998 N4BP3O15049 544 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 FAM107AO95990 144 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 MYL1P05976 194 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 CRKP46108 304 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 ICA1Q05084 483 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 ORC2Q13416 577 aaPredicted RBP15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 CD302Q8IX05 232 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 RASSF8Q8NHQ8 419 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 TBCKQ8TEA7 893 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 NELFBQ8WX92 580 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 SGSM3Q96HU1 749 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 BATF3Q9NR55 127 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 TMEM260Q9NX78 707 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 BIN2Q9UBW5 565 aaPredicted RBP15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
RABGGTA-220ENST00000560998 ENC1O14682 589 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 COBLO75128 1261 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 HLA-DOAP06340 250 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 PRLRP16471 622 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CLNS1AP54105 237 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 KCNB1Q14721 858 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 KRT31Q15323 416 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 RNF187Q5TA31 235 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms