RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ADD2P35612 726 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 PSEN2P49810 448 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 SNAP25P60880 206 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 MFSD10Q14728 455 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 ASTLQ6HA08 431 aaPredicted RBP11.31□□□□□ -0.6
HERC1-210ENST00000560897 TRAF7Q6Q0C0 670 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 UBALD2Q8IYN6 164 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 KIAA2013Q8IYS2 634 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 PLVAPQ9BX97 442 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 CLEC1BQ9P126 229 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 BARX2Q9UMQ3 279 aaPredicted RBP11.31□□□□□ -0.6
HERC1-210ENST00000560897 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
HERC1-210ENST00000560897 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
HERC1-210ENST00000560897 KMT2BQ9UMN6 2715 aaPredicted RBP11.3□□□□□ -0.6
HERC1-210ENST00000560897 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 IGKV6D-41A0A0C4DH26 115 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 PLA2G6O60733 806 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 SRGAP2BP0DMP2 458 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 MCCP23508 829 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 NRIP1P48552 1158 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 ST3GAL2Q16842 350 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 TRIM71Q2Q1W2 868 aaKnown RBP11.3□□□□□ -0.6
HERC1-210ENST00000560897 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 KAT2BQ92831 832 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 APBB2Q92870 758 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 PRR12Q9ULL5 1215 aa11.3□□□□□ -0.6
HERC1-210ENST00000560897 MYH7P12883 1935 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 FSD2A1L4K1 749 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 NFIBO00712 420 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 LMNAP02545 664 aaKnown RBP11.29□□□□□ -0.6
HERC1-210ENST00000560897 BTG3Q14201 252 aaPredicted RBP11.29□□□□□ -0.6
HERC1-210ENST00000560897 SLC30A10Q6XR72 485 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
HERC1-210ENST00000560897 KREMEN2Q8NCW0 462 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 DNERQ8NFT8 737 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 WNT8BQ93098 351 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 PAG1Q9NWQ8 432 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
HERC1-210ENST00000560897 PRDM1O75626 825 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 ARIH2O95376 493 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 ZNF286BP0CG31 522 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
HERC1-210ENST00000560897 CCDC96Q2M329 555 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 ZSCAN25Q6NSZ9 544 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 SEPT14Q6ZU15 432 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 ADGRD2Q7Z7M1 963 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 CLP1Q92989 425 aaKnown RBP11.28□□□□□ -0.6
HERC1-210ENST00000560897 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 SEMA4AQ9H3S1 761 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 TSHZ2Q9NRE2 1034 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 PCDHGC5Q9Y5F6 944 aa11.28□□□□□ -0.6
HERC1-210ENST00000560897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.27□□□□□ -0.61
HERC1-210ENST00000560897 ANP32CO43423 234 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 F2P00734 622 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 CTSHP09668 335 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
HERC1-210ENST00000560897 TRIM27P14373 513 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 EDNRBP24530 442 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 TDO2P48775 406 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 CLCN5P51795 746 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
HERC1-210ENST00000560897 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 UBE3CQ15386 1083 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 LY6KQ17RY6 165 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 SLFNL1Q499Z3 407 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 CLASRPQ8N2M8 674 aaKnown RBP11.27□□□□□ -0.61
HERC1-210ENST00000560897 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 P2RX5Q93086 422 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 HAUS7Q99871 368 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 TLE6Q9H808 572 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 IL1RAPL2Q9NP60 686 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 STX8Q9UNK0 236 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 ZFHX4Q86UP3 3567 aa11.27□□□□□ -0.61
HERC1-210ENST00000560897 C17orf102A2RUQ5 167 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 CAND2O75155 1236 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 GLP2RO95838 553 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
HERC1-210ENST00000560897 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
HERC1-210ENST00000560897 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
HERC1-210ENST00000560897 ANGPT1Q15389 498 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 HSP90AB4PQ58FF6 505 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms