RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 TTLL11Q8NHH1 800 aa7.38□□□□□ -1.23
HMG20A-211ENST00000560867 RNF38Q9H0F5 515 aa7.38□□□□□ -1.23
HMG20A-211ENST00000560867 NGRNQ9NPE2 291 aaKnown RBP7.38□□□□□ -1.23
HMG20A-211ENST00000560867 DBR1Q9UK59 544 aaKnown RBP7.38□□□□□ -1.23
HMG20A-211ENST00000560867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
HMG20A-211ENST00000560867 NUDT19A8MXV4 375 aa7.37□□□□□ -1.23
HMG20A-211ENST00000560867 F8W031 263 aaPredicted RBP7.37□□□□□ -1.23
HMG20A-211ENST00000560867 CKMP06732 381 aa7.37□□□□□ -1.23
HMG20A-211ENST00000560867 VIL1P09327 827 aaKnown RBP7.37□□□□□ -1.23
HMG20A-211ENST00000560867 ARHGAP44Q17R89 818 aa7.37□□□□□ -1.23
HMG20A-211ENST00000560867 FBXO15Q8NCQ5 510 aaPredicted RBP7.37□□□□□ -1.23
HMG20A-211ENST00000560867 DDX1Q92499 740 aaKnown RBP7.37□□□□□ -1.23
HMG20A-211ENST00000560867 PCDH18Q9HCL0 1135 aa7.37□□□□□ -1.23
HMG20A-211ENST00000560867 PPARGC1AQ9UBK2 798 aaKnown RBP7.37□□□□□ -1.23
HMG20A-211ENST00000560867 TNPO3Q9Y5L0 923 aaKnown RBP7.37□□□□□ -1.23
HMG20A-211ENST00000560867 TEX51A0A1B0GUA7 166 aa7.36□□□□□ -1.23
HMG20A-211ENST00000560867 CCDC66A2RUB6 948 aa7.36□□□□□ -1.23
HMG20A-211ENST00000560867 SDSP20132 328 aa7.36□□□□□ -1.23
HMG20A-211ENST00000560867 FIGNQ5HY92 759 aa7.36□□□□□ -1.23
HMG20A-211ENST00000560867 MIB1Q86YT6 1006 aa7.36□□□□□ -1.23
HMG20A-211ENST00000560867 BHLHE22Q8NFJ8 381 aaPredicted RBP7.36□□□□□ -1.23
HMG20A-211ENST00000560867 CPA5Q8WXQ8 436 aa7.36□□□□□ -1.23
HMG20A-211ENST00000560867 LIN37Q96GY3 246 aaPredicted RBP7.36□□□□□ -1.23
HMG20A-211ENST00000560867 DCP1AQ9NPI6 582 aaPredicted RBP7.36□□□□□ -1.23
HMG20A-211ENST00000560867 ZC3H12DA2A288 527 aaKnown RBP7.35□□□□□ -1.23
HMG20A-211ENST00000560867 LRRC10BA6NIK2 292 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 IRS4O14654 1257 aaPredicted RBP7.35□□□□□ -1.23
HMG20A-211ENST00000560867 KCNA6P17658 529 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 GJA4P35212 333 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 GALK1P51570 392 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 EPHA5P54756 1037 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
HMG20A-211ENST00000560867 XP32Q5T750 250 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 HHIPL2Q6UWX4 724 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 KRT26Q7Z3Y9 468 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 PIP4K2CQ8TBX8 421 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 JAM3Q9BX67 310 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 NSUN3Q9H649 340 aaKnown RBP7.35□□□□□ -1.23
HMG20A-211ENST00000560867 CABP5Q9NP86 173 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 CATSPERZQ9NTU4 200 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 HSPBP1Q9NZL4 362 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 MYOTQ9UBF9 498 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 DSEQ9UL01 958 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 PCDHB4Q9Y5E5 795 aa7.35□□□□□ -1.23
HMG20A-211ENST00000560867 A0A087X0B3 334 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 GSG1L2A8MUP6 293 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 SGSM2O43147 1006 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 PAX4O43316 350 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 SOX5P35711 763 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 PRR5P85299 388 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 CFAP100Q494V2 611 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 TMEM177Q53S58 311 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 OTOP1Q7RTM1 612 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 DHX37Q8IY37 1157 aaKnown RBP7.34□□□□□ -1.23
HMG20A-211ENST00000560867 FAM177A1Q8N128 213 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-211ENST00000560867 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 SPC25Q9HBM1 224 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMG20A-211ENST00000560867 SAMD15Q9P1V8 674 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 ASH2LQ9UBL3 628 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 PALD1Q9ULE6 856 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 SRPK3Q9UPE1 567 aa7.34□□□□□ -1.23
HMG20A-211ENST00000560867 SBNO2Q9Y2G9 1366 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 IRS2Q9Y4H2 1338 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 LOC105371045A0A1W2PR82 267 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 PDE8AO60658 829 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 JMJD7P0C870 316 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 PYGMP11217 842 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 NCLP19338 710 aaKnown RBP7.33□□□□□ -1.24
HMG20A-211ENST00000560867 VIPR1P32241 457 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 STAT3P40763 770 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 MASP1P48740 699 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 MLANAQ16655 118 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 CDCA2Q69YH5 1023 aaPredicted RBP7.33□□□□□ -1.24
HMG20A-211ENST00000560867 PRR23BQ6ZRT6 265 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 OVCH1Q7RTY7 1134 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 TMC6Q7Z403 805 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 ZNF605Q86T29 641 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 FAM126BQ8IXS8 530 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 IGSF22Q8N9C0 903 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 CHST14Q8NCH0 376 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 WNK4Q96J92 1243 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 PPP1R16BQ96T49 567 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 TARS2Q9BW92 718 aaKnown RBP7.33□□□□□ -1.24
HMG20A-211ENST00000560867 BRINP2Q9C0B6 783 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 CAAP1Q9H8G2 361 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 SIRT5Q9NXA8 310 aa7.33□□□□□ -1.24
HMG20A-211ENST00000560867 TCRBV5S2A0A599 114 aa7.32□□□□□ -1.24
HMG20A-211ENST00000560867 CBX4O00257 560 aa7.32□□□□□ -1.24
HMG20A-211ENST00000560867 DNAJC6O75061 913 aa7.32□□□□□ -1.24
HMG20A-211ENST00000560867 CLASP2O75122 1294 aaKnown RBP7.32□□□□□ -1.24
HMG20A-211ENST00000560867 SRGAP2CP0DJJ0 459 aa7.32□□□□□ -1.24
HMG20A-211ENST00000560867 MYCLP1P12525 358 aaPredicted RBP7.32□□□□□ -1.24
HMG20A-211ENST00000560867 NCAM1P13591 858 aa7.32□□□□□ -1.24
HMG20A-211ENST00000560867 PDE6AP16499 860 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms