RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
IRF9-211ENST00000560852 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 A6NJR5 290 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 LRRC37A2A6NM11 1700 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 CTAGE5O15320 804 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 ADAMTS4O75173 837 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 ARIH2O95376 493 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 HSP90AA1P07900 732 aaKnown RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 KCNA2P16389 499 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 SMPD1P17405 629 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 TOB1P50616 345 aaPredicted RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 GUCY1B3Q02153 619 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 MTMR1Q13613 665 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 INF2Q27J81 1249 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 MYSM1Q5VVJ2 828 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 B3GNT9Q6UX72 402 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 PGBD1Q96JS3 809 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 RIT2Q99578 217 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 KCNMB3Q9NPA1 279 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.21
IRF9-211ENST00000560852 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
IRF9-211ENST00000560852 ADCY6O43306 1168 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 BRD1O95696 1058 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 TXNP10599 105 aaKnown RBP13.76□□□□□ -0.21
IRF9-211ENST00000560852 RARBP10826 455 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 SP2Q02086 613 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 RESTQ13127 1097 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
IRF9-211ENST00000560852 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 ETNPPLQ8TBG4 499 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 SLC5A5Q92911 643 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 MTMR9Q96QG7 549 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 TSEN34Q9BSV6 310 aaKnown RBP13.76□□□□□ -0.21
IRF9-211ENST00000560852 RNF208Q9H0X6 261 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
IRF9-211ENST00000560852 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
IRF9-211ENST00000560852 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
IRF9-211ENST00000560852 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.75□□□□□ -0.21
IRF9-211ENST00000560852 KPNA6O60684 536 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 ATP9AO75110 1047 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 ATG7O95352 703 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 GH1P01241 217 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 ARP10275 920 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 SEPT14Q6ZU15 432 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 EEPD1Q7L9B9 569 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 PLA2G4DQ86XP0 818 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 ARRDC4Q8NCT1 418 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 U2AF1L4Q8WU68 220 aaKnown RBP13.75□□□□□ -0.21
IRF9-211ENST00000560852 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
IRF9-211ENST00000560852 NOL7Q9UMY1 257 aaKnown RBP13.75□□□□□ -0.21
IRF9-211ENST00000560852 MRVI1Q9Y6F6 885 aa13.75□□□□□ -0.21
IRF9-211ENST00000560852 CENPFP49454 3210 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 IPO5O00410 1097 aaKnown RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 LAD1O00515 517 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 MSH4O15457 936 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 PSMD10O75832 226 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 ZNF76P36508 570 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 LETM2Q2VYF4 491 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 UBE2Q1Q7Z7E8 422 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 PPTC7Q8NI37 304 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
IRF9-211ENST00000560852 DDX25Q9UHL0 483 aaKnown RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
IRF9-211ENST00000560852 SYNRGQ9UMZ2 1314 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 IGKV6D-21A0A0A0MT36 114 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 TDP2O95551 362 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 BMP15O95972 392 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 PRPHP41219 470 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 ITGB3BPQ13352 177 aaPredicted RBP13.73□□□□□ -0.21
IRF9-211ENST00000560852 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 PRR16Q569H4 304 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 SLFN12Q8IYM2 578 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 HAS1Q92839 578 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 DEFB118Q96PH6 123 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 SEZ6LQ9BYH1 1024 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 ZDHHC9Q9Y397 364 aa13.73□□□□□ -0.21
IRF9-211ENST00000560852 MOXD2PA6NHM9 499 aa13.72□□□□□ -0.21
IRF9-211ENST00000560852 DNM1LO00429 736 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms