RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 TEX2Q8IWB9 1127 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 FSIP1Q8NA03 581 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 ARRDC4Q8NCT1 418 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 MAFAQ8NHW3 353 aaPredicted RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 MRPS27Q92552 414 aaKnown RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 FUCA2Q9BTY2 467 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 MOV10L1Q9BXT6 1211 aaKnown RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 PSTPIP2Q9H939 334 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 DDX19AQ9NUU7 478 aaKnown RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 TMEM260Q9NX78 707 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 PPP1R9AQ9ULJ8 1098 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 CTDP1Q9Y5B0 961 aaPredicted RBP9.15□□□□□ -0.94
CPNE6-218ENST00000560845 TTC28Q96AY4 2481 aa9.15□□□□□ -0.94
CPNE6-218ENST00000560845 PRUNE2Q8WUY3 3088 aa9.15□□□□□ -0.95
CPNE6-218ENST00000560845 CDH23Q9H251 3354 aa9.15□□□□□ -0.95
CPNE6-218ENST00000560845 WNT7AO00755 349 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 SEPT4O43236 478 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 MYCNP04198 464 aaPredicted RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 ICAM1P05362 532 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 FDX1P10109 184 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 MCM7P33993 719 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 CLCN1P35523 988 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 CLK2P49760 499 aaKnown RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 SMAD3P84022 425 aaKnown RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 ATP2C1P98194 919 aaPredicted RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 ZNF174Q15697 407 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 MCTP2Q6DN12 878 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 NEK8Q86SG6 692 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 SHCBP1Q8NEM2 672 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 TBCKQ8TEA7 893 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 BADQ92934 168 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 SPATC1LQ9H0A9 340 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 SEMA6BQ9H3T3 888 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 TSPY26PQ9H489 355 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 GOLPH3LQ9H4A5 285 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 PDLIM7Q9NR12 457 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 FBXO2Q9UK22 296 aaPredicted RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 PNMA2Q9UL42 364 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 CCPG1Q9ULG6 757 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 MRPL11Q9Y3B7 192 aaKnown RBP9.14□□□□□ -0.95
CPNE6-218ENST00000560845 ZNF236Q9UL36 1845 aa9.14□□□□□ -0.95
CPNE6-218ENST00000560845 ESPNB1AK53 854 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 STRNO43815 780 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 KINO60870 393 aaKnown RBP9.13□□□□□ -0.95
CPNE6-218ENST00000560845 COBLO75128 1261 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 ZBED4O75132 1171 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 ERCC3P19447 782 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 FAM160A1Q05DH4 1040 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 COG2Q14746 738 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 LETM2Q2VYF4 491 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 SH3RF1Q7Z6J0 888 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 MYLIPQ8WY64 445 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 FERMT2Q96AC1 680 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 ANO3Q9BYT9 981 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 NUP62CLQ9H1M0 184 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 TTYH1Q9H313 450 aaPredicted RBP9.13□□□□□ -0.95
CPNE6-218ENST00000560845 SLC38A10Q9HBR0 1119 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 HOXC10Q9NYD6 342 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 DACT1Q9NYF0 836 aa9.13□□□□□ -0.95
CPNE6-218ENST00000560845 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
CPNE6-218ENST00000560845 ZNF536O15090 1300 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 TRIM43BA6NCK2 446 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 GCOM1H8Y6P7 765 aaPredicted RBP9.12□□□□□ -0.95
CPNE6-218ENST00000560845 PIK3CDO00329 1044 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 LAD1O00515 517 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 MEIS2O14770 477 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 OPLAHO14841 1288 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 NEMFO60524 1076 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 CCNT1O60563 726 aaKnown RBP9.12□□□□□ -0.95
CPNE6-218ENST00000560845 NR1I2O75469 434 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 FOSP01100 380 aaPredicted RBP9.12□□□□□ -0.95
CPNE6-218ENST00000560845 POLR2MP0CAP2 368 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 FOSL2P15408 326 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 PFKFB1P16118 471 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 CMA1P23946 247 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 DSG3P32926 999 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 ADCYAP1R1P41586 468 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 PTGDRQ13258 359 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 LRRC41Q15345 812 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 PRAMEF19Q5SWL8 479 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 C1orf53Q5VUE5 145 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 RESP18Q5W5W9 173 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 SHC4Q6S5L8 630 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 ABRAQ8N0Z2 381 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 MB21D1Q8N884 522 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
CPNE6-218ENST00000560845 TRIM43Q96BQ3 446 aaPredicted RBP9.12□□□□□ -0.95
CPNE6-218ENST00000560845 CLIC6Q96NY7 704 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 NAP1L4Q99733 375 aaKnown RBP9.12□□□□□ -0.95
CPNE6-218ENST00000560845 CLSTN2Q9H4D0 955 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 MROH8Q9H579 483 aa9.12□□□□□ -0.95
CPNE6-218ENST00000560845 RAVER2Q9HCJ3 691 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms