RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 RPAINQ86UA6 219 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 PANX2Q96RD6 677 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 PUS3Q9BZE2 481 aaKnown RBP13.73□□□□□ -0.21
SYNM-203ENST00000560674 SMYD2Q9NRG4 433 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 SAMSN1Q9NSI8 373 aaKnown RBP13.73□□□□□ -0.21
SYNM-203ENST00000560674 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 A0A087WWV3 80 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
SYNM-203ENST00000560674 HSPA2P54652 639 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 SLMAPQ14BN4 828 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 TRMT2AQ8IZ69 625 aaKnown RBP13.72□□□□□ -0.21
SYNM-203ENST00000560674 ACCSQ96QU6 501 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 EPS15L1Q9UBC2 864 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 CSADQ9Y600 493 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 PPP1R2P3Q6NXS1 205 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 WHAMMQ8TF30 809 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 SLC5A4Q9NY91 659 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 SYNJ2BP-COX16A0A087WUM0 186 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
SYNM-203ENST00000560674 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 SEMA3EO15041 775 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 MX2P20592 715 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 STX1BP61266 288 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 PDCD7Q8N8D1 485 aaKnown RBP13.72□□□□□ -0.21
SYNM-203ENST00000560674 RNF169Q8NCN4 708 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
SYNM-203ENST00000560674 COX16Q9P0S2 106 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 NDUFA10O95299 355 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 CPP00450 1065 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 EIF4A3P38919 411 aaKnown RBP13.72□□□□□ -0.21
SYNM-203ENST00000560674 BIRC2Q13490 618 aa13.72□□□□□ -0.21
SYNM-203ENST00000560674 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 ABL1P00519 1130 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 SERPING1P05155 500 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 IFRD2Q12894 506 aaPredicted RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 FAM133BQ5BKY9 247 aaKnown RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 DACT3Q96B18 629 aaPredicted RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 SPTLC3Q9NUV7 552 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 LRRN2O75325 713 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 SRGAP2BP0DMP2 458 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 TFDP1Q14186 410 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 SESTD1Q86VW0 696 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 KIAA0825Q8IV33 1275 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 ZNF713Q8N859 430 aaPredicted RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 CCHCR1Q8TD31 782 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 ZNF577Q9BSK1 485 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 TUBB6Q9BUF5 446 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 KRT1P04264 644 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 S100BP04271 92 aaPredicted RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 CASP8Q14790 479 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.21
SYNM-203ENST00000560674 FBXO41Q8TF61 875 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 CCDC17Q96LX7 622 aa13.71□□□□□ -0.21
SYNM-203ENST00000560674 SH2B2O14492 632 aaPredicted RBP13.71□□□□□ -0.22
SYNM-203ENST00000560674 MCF2LO15068 1137 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 GFPT2O94808 682 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 NR1D1P20393 614 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 CCNE1P24864 410 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 RESTQ13127 1097 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 NEK9Q8TD19 979 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 TBCKQ8TEA7 893 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 ATP6V0A1Q93050 837 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 SPC25Q9HBM1 224 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 GCNT4Q9P109 453 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 SEPT9Q9UHD8 586 aaPredicted RBP13.71□□□□□ -0.22
SYNM-203ENST00000560674 CEP170Q5SW79 1584 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 ADD2P35612 726 aa13.71□□□□□ -0.22
SYNM-203ENST00000560674 SPATS2LQ9NUQ6 558 aaKnown RBP13.71□□□□□ -0.22
SYNM-203ENST00000560674 SRPRBQ9Y5M8 271 aaKnown RBP13.71□□□□□ -0.22
SYNM-203ENST00000560674 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
SYNM-203ENST00000560674 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
SYNM-203ENST00000560674 NOVA2Q9UNW9 492 aaKnown RBP13.7□□□□□ -0.22
SYNM-203ENST00000560674 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
SYNM-203ENST00000560674 ANKRD36BP1Q96IX9 119 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
SYNM-203ENST00000560674 LPXNO60711 386 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 MT-ND3P03897 115 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 ACTN1P12814 892 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 SLCO1A2P46721 670 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 EIF3BP55884 814 aaKnown RBP13.7□□□□□ -0.22
SYNM-203ENST00000560674 NR5A1Q13285 461 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 DCLK2Q8N568 766 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 MCUQ8NE86 351 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 TMEM206Q9H813 350 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 RASGRF2O14827 1237 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 CLIC2O15247 247 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 TTLL1O95922 423 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 DOK7Q18PE1 504 aa13.7□□□□□ -0.22
SYNM-203ENST00000560674 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms