RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 PTPRZ1P23471 2315 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 TMEM221A6NGB7 291 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 B4DLN1 442 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 M0R296 226 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 NCK2O43639 380 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 UPP2O95045 317 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 MRPL12P52815 198 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 HYAL1Q12794 435 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 MFSD10Q14728 455 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 TSHZ3Q63HK5 1081 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 TRIM67Q6ZTA4 783 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 TAAR1Q96RJ0 339 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 NACAP1Q9BZK3 213 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 EMSYQ7Z589 1322 aa10.54□□□□□ -0.72
RABGGTA-217ENST00000560521 BAZ2BQ9UIF8 2168 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 FNDC1Q4ZHG4 1894 aaPredicted RBP10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 DCHS1Q96JQ0 3298 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 RSPH10B2B2RC85 870 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 STXBP3O00186 592 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 FOXP2O15409 715 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 RANBP6O60518 1105 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 GFRA3O60609 400 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 TBX10O75333 385 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 F2P00734 622 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 LINC00271P0C7V0 271 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 RSPH10BP0C881 870 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 ZNF286BP0CG31 522 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 THPOP40225 353 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 EMID1Q96A84 441 aaPredicted RBP10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 YME1L1Q96TA2 773 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 PRRX2Q99811 253 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 KATNAL1Q9BW62 490 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 FAM86C1Q9NVL1 165 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 CACNA1HO95180 2353 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 WDR19Q8NEZ3 1342 aa10.53□□□□□ -0.72
RABGGTA-217ENST00000560521 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 GRM6O15303 877 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 LINC01565O15544 149 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 FGRP09769 529 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 PDHBP11177 359 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 ZXDAP98168 799 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 SMAD4Q13485 552 aaKnown RBP10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 STXBP2Q15833 593 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 SERINC5Q86VE9 423 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 PNMA2Q9UL42 364 aa10.52□□□□□ -0.73
RABGGTA-217ENST00000560521 ZFHX2Q9C0A1 2572 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 FAM186AA6NE01 2351 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 CCER2I3L3R5 266 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 RB1P06400 928 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 TOP1P11387 765 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 BMPR1AP36894 532 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 FOXK2Q01167 660 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 ADAM15Q13444 863 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 LAMC2Q13753 1193 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 PKN1Q16512 942 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 USH1GQ495M9 461 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 ZMYM1Q5SVZ6 1142 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 SUGP1Q8IWZ8 645 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 DHX37Q8IY37 1157 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 FBXL6Q8N531 539 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 PPTC7Q8NI37 304 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 NSUN6Q8TEA1 469 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 MSLNLQ96KJ4 702 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 LMAN2LQ9H0V9 348 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 CD207Q9UJ71 328 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 ANAPC4Q9UJX5 808 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
RABGGTA-217ENST00000560521 LOC730098B7Z3J9 87 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 ORC4O43929 436 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 PPFIA4O75335 1185 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 EYA4O95677 639 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 SNHG28P0DPA3 235 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 CTNNB1P35222 781 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 VCPP55072 806 aaKnown RBP10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 CAMK1Q14012 370 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 SEPT8Q92599 483 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 IL17RAQ96F46 866 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 IWS1Q96ST2 819 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 RMDN3Q96TC7 470 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 C16orf70Q9BSU1 422 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 IFIH1Q9BYX4 1025 aaKnown RBP10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 CPVLQ9H3G5 476 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 EVPLQ92817 2033 aa10.5□□□□□ -0.73
RABGGTA-217ENST00000560521 RIF1Q5UIP0 2472 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms