RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-215ENST00000560424 MFSD10Q14728 455 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 BMP2KLQ5H9B9 411 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 SEPT14Q6ZU15 432 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 FIBCD1Q8N539 461 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 SEPT8Q92599 483 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 APPBP2Q92624 585 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 CTAGE1Q96RT6 745 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 BACH2Q9BYV9 841 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 IFIH1Q9BYX4 1025 aaKnown RBP10.89□□□□□ -0.67
SMAD3-215ENST00000560424 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
SMAD3-215ENST00000560424 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 NLRC5Q86WI3 1866 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 CACNA1AO00555 2505 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 ARIH2O95376 493 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 RB1P06400 928 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 SLC16A2P36021 539 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
SMAD3-215ENST00000560424 DLX2Q07687 328 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-215ENST00000560424 LY6KQ17RY6 165 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 RALGAPA2Q2PPJ7 1873 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 SKAP1Q86WV1 359 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 DCAF4Q8WV16 495 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 KAT2BQ92831 832 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 TOP1MTQ969P6 601 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 NAPBQ9H115 298 aa10.88□□□□□ -0.67
SMAD3-215ENST00000560424 PATL2C9JE40 543 aaKnown RBP10.87□□□□□ -0.67
SMAD3-215ENST00000560424 H0Y858 1186 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 TBX10O75333 385 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 ZNF286BP0CG31 522 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 EDNRBP24530 442 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 ID4P47928 161 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 HYAL1Q12794 435 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 C8orf34Q49A92 452 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 PLEKHG4Q58EX7 1191 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 ZBTB33Q86T24 672 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 PLEKHM2Q8IWE5 1019 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 IFNL3Q8IZI9 196 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 IL17RAQ96F46 866 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-215ENST00000560424 TLR9Q9NR96 1032 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 CFAP54Q96N23 3096 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 KMT2EQ8IZD2 1858 aa10.87□□□□□ -0.67
SMAD3-215ENST00000560424 RANBP6O60518 1105 aaKnown RBP10.86□□□□□ -0.67
SMAD3-215ENST00000560424 ZFYP08048 801 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-215ENST00000560424 AVPR2P30518 371 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 NUBP1P53384 320 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 VCPP55072 806 aaKnown RBP10.86□□□□□ -0.67
SMAD3-215ENST00000560424 PPARAQ07869 468 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 MBTPS1Q14703 1052 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 STXBP2Q15833 593 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 TTBK2Q6IQ55 1244 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 RASGRP2Q7LDG7 609 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 OSBP2Q969R2 916 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 FSD1Q9BTV5 496 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
SMAD3-215ENST00000560424 FRMPD2Q68DX3 1309 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-215ENST00000560424 C5orf67F2Z3F1 127 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 GRM6O15303 877 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 RNF113AO15541 343 aaKnown RBP10.85□□□□□ -0.67
SMAD3-215ENST00000560424 LINC01565O15544 149 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 F2P00734 622 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMAD3-215ENST00000560424 BMPR1AP36894 532 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 ZNF200P98182 395 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-215ENST00000560424 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 TRIM71Q2Q1W2 868 aaKnown RBP10.85□□□□□ -0.67
SMAD3-215ENST00000560424 USH1GQ495M9 461 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 CCDC62Q6P9F0 684 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 KBTBD3Q8NAB2 608 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 NSUN6Q8TEA1 469 aaKnown RBP10.85□□□□□ -0.67
SMAD3-215ENST00000560424 CLEC4DQ8WXI8 215 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 APBB2Q92870 758 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 ATP6V0A1Q93050 837 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 WNT8BQ93098 351 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 GPATCH3Q96I76 525 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 RPGRIP1Q96KN7 1286 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 TOMM22Q9NS69 142 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 TRPC6Q9Y210 931 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 MRVI1Q9Y6F6 885 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
SMAD3-215ENST00000560424 C17orf102A2RUQ5 167 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 PRR23AA6NEV1 266 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 LOC730098B7Z3J9 87 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 NMT2O60551 498 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 EIF5BO60841 1220 aaKnown RBP10.84□□□□□ -0.67
SMAD3-215ENST00000560424 MMP1P03956 469 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 CTSHP09668 335 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 PDE1AP54750 535 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 ADAM15Q13444 863 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 ASCL5Q7RTU5 278 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 SERINC5Q86VE9 423 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms