RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 TIMP1P01033 207 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 CD4P01730 458 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 CPA1P15085 419 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 PGM5Q15124 567 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 PPP1R12CQ9BZL4 782 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 TRPV6Q9H1D0 765 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 SEC63Q9UGP8 760 aaKnown RBP16.98■□□□□ 0.31
IDH3A-219ENST00000560414 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 RGS20O76081 388 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 KRT32Q14532 448 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
IDH3A-219ENST00000560414 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 SYNE3Q6ZMZ3 975 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 TMTC3Q6ZXV5 915 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 VSIG10LQ86VR7 867 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 AFG1LQ8WV93 481 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 MTG1Q9BT17 334 aaPredicted RBP16.97■□□□□ 0.31
IDH3A-219ENST00000560414 DDX41Q9UJV9 622 aaKnown RBP16.97■□□□□ 0.31
IDH3A-219ENST00000560414 MRVI1Q9Y6F6 885 aa16.97■□□□□ 0.31
IDH3A-219ENST00000560414 SNPHO15079 494 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 SORBS3O60504 671 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 B4GALT4O60513 344 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 GH1P01241 217 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 HSPA4P34932 840 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 FPGSQ05932 587 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 ZNF710Q8N1W2 664 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 KCNB2Q92953 911 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 PPP4R2Q9NY27 417 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 SNX14Q9Y5W7 946 aa16.96■□□□□ 0.31
IDH3A-219ENST00000560414 GRXCR2A6NFK2 248 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 CCND2P30279 289 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 CYP2C18P33260 490 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 CHMP4BP1P59074 171 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 NBPF20Q3BBV1 942 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 GPKOWQ92917 476 aaPredicted RBP eCLIP16.95■□□□□ 0.3
IDH3A-219ENST00000560414 JAKMIP1Q96N16 626 aaKnown RBP16.95■□□□□ 0.3
IDH3A-219ENST00000560414 ALDH8A1Q9H2A2 487 aaPredicted RBP16.95■□□□□ 0.3
IDH3A-219ENST00000560414 TRMT13Q9NUP7 481 aaKnown RBP16.95■□□□□ 0.3
IDH3A-219ENST00000560414 KIAA1217Q5T5P2 1943 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 UMODL1Q5DID0 1318 aa16.95■□□□□ 0.3
IDH3A-219ENST00000560414 KLF18A0A0U1RQI7 1052 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 MEIS2O14770 477 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 ZBTB43O43298 467 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 KPNA6O60684 536 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 MMP3P08254 477 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 RTN1Q16799 776 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 Q7L0L9 218 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 ZSWIM6Q9HCJ5 1215 aa16.94■□□□□ 0.3
IDH3A-219ENST00000560414 NAP1L2Q9ULW6 460 aaPredicted RBP16.94■□□□□ 0.3
IDH3A-219ENST00000560414 REC8O95072 547 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 HMGB1P09429 215 aaKnown RBP16.93■□□□□ 0.3
IDH3A-219ENST00000560414 CSF2RAP15509 400 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 MRPS9P82933 396 aaKnown RBP16.93■□□□□ 0.3
IDH3A-219ENST00000560414 FGD1P98174 961 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 SP2Q02086 613 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 Q6ZUG5 572 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 C16orf59Q7L2K0 433 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 DHX37Q8IY37 1157 aaKnown RBP16.93■□□□□ 0.3
IDH3A-219ENST00000560414 DDX12PQ92771 950 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 CUL5Q93034 780 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 HIPK3Q9H422 1215 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 PSTPIP2Q9H939 334 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 RTEL1Q9NZ71 1219 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 CNTNAP5Q8WYK1 1306 aa16.93■□□□□ 0.3
IDH3A-219ENST00000560414 SCN10AQ9Y5Y9 1956 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 GOLGA8AA7E2F4 631 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 GOLGA8BA8MQT2 603 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 ACRP10323 421 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 CYP2C9P11712 490 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 CDC27P30260 824 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 CCL23P55773 120 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 APOBRQ0VD83 1088 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 FUT2Q10981 343 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 UBE2SQ16763 222 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 HEATR3Q7Z4Q2 680 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 TMEM199Q8N511 208 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 DEFB123Q8N688 67 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 KAT2BQ92831 832 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 RNPC3Q96LT9 517 aaKnown RBP16.92■□□□□ 0.3
IDH3A-219ENST00000560414 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.92■□□□□ 0.3
IDH3A-219ENST00000560414 NOC4LQ9BVI4 516 aaKnown RBP16.92■□□□□ 0.3
IDH3A-219ENST00000560414 BCAS3Q9H6U6 928 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
IDH3A-219ENST00000560414 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
IDH3A-219ENST00000560414 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
IDH3A-219ENST00000560414 GGPS1O95749 300 aa16.91■□□□□ 0.3
IDH3A-219ENST00000560414 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
IDH3A-219ENST00000560414 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
IDH3A-219ENST00000560414 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.3
IDH3A-219ENST00000560414 DGKDQ16760 1214 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms