RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 SMG8Q8ND04 991 aaKnown RBP7.46□□□□□ -1.22
USP8-210ENST00000560379 SVIPQ8NHG7 77 aa7.46□□□□□ -1.22
USP8-210ENST00000560379 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
USP8-210ENST00000560379 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.22
USP8-210ENST00000560379 ARHGEF4Q9NR80 690 aa7.46□□□□□ -1.22
USP8-210ENST00000560379 CACNA2D2Q9NY47 1150 aa7.46□□□□□ -1.22
USP8-210ENST00000560379 CCDC7Q96M83 1385 aa7.46□□□□□ -1.22
USP8-210ENST00000560379 ATRNO75882 1429 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 TNFRSF10CO14798 259 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 NRDCO43847 1150 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 DNAJA2O60884 412 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 DRD2P14416 443 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 NEK2P51955 445 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 SV2CQ496J9 727 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 YOD1Q5VVQ6 348 aaPredicted RBP7.45□□□□□ -1.22
USP8-210ENST00000560379 ZNF772Q68DY9 489 aaPredicted RBP7.45□□□□□ -1.22
USP8-210ENST00000560379 MYO1HQ8N1T3 1032 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 KCNH5Q8NCM2 988 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 C1orf131Q8NDD1 294 aaKnown RBP7.45□□□□□ -1.22
USP8-210ENST00000560379 IPO4Q8TEX9 1081 aaKnown RBP7.45□□□□□ -1.22
USP8-210ENST00000560379 GATA6Q92908 595 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 IPO9Q96P70 1041 aaKnown RBP7.45□□□□□ -1.22
USP8-210ENST00000560379 SLC12A5Q9H2X9 1139 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 CNNM2Q9H8M5 875 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 ARNT2Q9HBZ2 717 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 INTS7Q9NVH2 962 aaKnown RBP7.45□□□□□ -1.22
USP8-210ENST00000560379 ZIM2Q9NZV7 527 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 KIF7Q2M1P5 1343 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 RTL1A6NKG5 1358 aa7.45□□□□□ -1.22
USP8-210ENST00000560379 BCL9LQ86UU0 1499 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 TRBV23-1A0A0A0MS06 115 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 TRAV20A0A0B4J274 112 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 AKAP10O43572 662 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 FOSP01100 380 aaPredicted RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 PLCG1P19174 1290 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 AP3B2Q13367 1082 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 MTMR1Q13613 665 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 INPP5AQ14642 412 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 CDCP2Q5VXM1 449 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 CHPFQ8IZ52 775 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 PDILTQ8N807 584 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 C2CD4AQ8NCU7 369 aaPredicted RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 GPBAR1Q8TDU6 330 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 LEO1Q8WVC0 666 aaPredicted RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 RUNDC1Q96C34 613 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 ARPC5LQ9BPX5 153 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 MRPL4Q9BYD3 311 aaKnown RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 ZC3H12CQ9C0D7 883 aaKnown RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 ZNF214Q9UL59 606 aaPredicted RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 SNCAIPQ9Y6H5 919 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 KIF24Q5T7B8 1368 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 KIAA0232Q92628 1395 aa7.44□□□□□ -1.22
USP8-210ENST00000560379 BLMP54132 1417 aaPredicted RBP7.44□□□□□ -1.22
USP8-210ENST00000560379 COL5A2P05997 1499 aaPredicted RBP7.43□□□□□ -1.22
USP8-210ENST00000560379 GLI3P10071 1580 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 FAM177BA6PVY3 158 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 TIMM44O43615 452 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 MYL1P05976 194 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 STRN3Q13033 797 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 IKBKEQ14164 716 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 SYCP2LQ5T4T6 812 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 NUTM2GQ5VZR2 741 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 ZKSCAN2Q63HK3 967 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 PPP4R4Q6NUP7 873 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 LRFN4Q6PJG9 635 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 NECAB2Q7Z6G3 386 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 SCUBE1Q8IWY4 988 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 C12orf50Q8NA57 414 aaPredicted RBP7.43□□□□□ -1.22
USP8-210ENST00000560379 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 FBLIM1Q8WUP2 373 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 DDX1Q92499 740 aaKnown RBP7.43□□□□□ -1.22
USP8-210ENST00000560379 SMAD5Q99717 465 aaKnown RBP7.43□□□□□ -1.22
USP8-210ENST00000560379 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 OSBPL1AQ9BXW6 950 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 ATG3Q9NT62 314 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 SLC5A4Q9NY91 659 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 THSD7AQ9UPZ6 1657 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 CAMTA1Q9Y6Y1 1673 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 AFF2P51816 1311 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 CGNL1Q0VF96 1302 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 AATKQ6ZMQ8 1374 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 NPC1L1Q9UHC9 1359 aa7.43□□□□□ -1.22
USP8-210ENST00000560379 SMG6Q86US8 1419 aaKnown RBP7.43□□□□□ -1.22
USP8-210ENST00000560379 FAM95CA0A1B0GW59 222 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 FAM163BP0C2L3 166 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 ITGB5P18084 799 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 RXRBP28702 533 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 ITKQ08881 620 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 MAP7Q14244 749 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 HSP90AA2PQ14568 343 aaPredicted RBP7.42□□□□□ -1.22
USP8-210ENST00000560379 BRD3Q15059 726 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 LHFPL2Q6ZUX7 228 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 HDXQ7Z353 690 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 VSIG10LQ86VR7 867 aa7.42□□□□□ -1.22
USP8-210ENST00000560379 PPM1KQ8N3J5 372 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms