RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TBC1D12O60347 775 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 SPIRE1Q08AE8 756 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 MTMR2Q13614 643 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 CT47A1Q5JQC4 288 aaPredicted RBP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 ATRIPQ8WXE1 791 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 P2RX5Q93086 422 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 WDR18Q9BV38 432 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 GLT8D2Q9H1C3 349 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 MAGEF1Q9HAY2 307 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 LIMA1Q9UHB6 759 aaKnown RBP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 BRCA1P38398 1863 aaKnown RBP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 B4DLN1 442 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 NFIBO00712 420 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 NRDCO43847 1150 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 MYL1P05976 194 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 PBX1P40424 430 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 KLK7P49862 253 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 ZNF280AP59817 542 aaPredicted RBP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 PABPC4Q13310 644 aaKnown RBP eCLIP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 ANGEL2Q5VTE6 544 aaKnown RBP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 PPFIBP1Q86W92 1011 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 CCDC47Q96A33 483 aaKnown RBP15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 RGL1Q9NZL6 768 aa15.72■□□□□ 0.11
CARMIL3-203ENST00000560349 AKR1B15C9JRZ8 316 aaPredicted RBP15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 EML1O00423 815 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 GPBP1Q86WP2 473 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 CATSPER3Q86XQ3 398 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 CHURC1Q8WUH1 139 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 RANBP17Q9H2T7 1088 aaKnown RBP15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 CCPG1Q9ULG6 757 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 H7C1D1 291 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 DMTNQ08495 405 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 CNNM4Q6P4Q7 775 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 UNC13DQ70J99 1090 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 ABCB11O95342 1321 aa15.71■□□□□ 0.11
CARMIL3-203ENST00000560349 CYP3A7-CYP3A51PA0A087WV96 503 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 GCOM1H8Y6P7 765 aaPredicted RBP15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 ZBTB39O15060 712 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 POLR2MP0CAP2 368 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 CYP3A7P24462 503 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 NELFCDQ8IXH7 590 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 DNAJC19Q96DA6 116 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 HOOK2Q96ED9 719 aa15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 CNOT6LQ96LI5 555 aaKnown RBP15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.1
CARMIL3-203ENST00000560349 DDX39AO00148 427 aaKnown RBP15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 CCNE1P24864 410 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 COASYQ13057 564 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 SPP2Q13103 211 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 ANKRD20A12PQ8NF67 263 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 PURBQ96QR8 312 aaKnown RBP15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 FZD9O00144 591 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 FLOT1O75955 427 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 ALAS1P13196 640 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 MMP14P50281 582 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 TNFAIP1Q13829 316 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 TRMT1LQ7Z2T5 733 aaKnown RBP15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 MBOAT7Q96N66 472 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 SH2D4AQ9H788 454 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 COL20A1Q9P218 1284 aa15.7■□□□□ 0.1
CARMIL3-203ENST00000560349 IGLV3-22A0A075B6J6 115 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 MFAP3LO75121 409 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 FOSP01100 380 aaPredicted RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 SPATA31C1P0DKV0 1188 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 CTTNQ14247 550 aaKnown RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 ARHGAP27Q6ZUM4 889 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 SLFN12Q8IYM2 578 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 PIGOQ8TEQ8 1089 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 TUBGCP2Q9BSJ2 902 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 V9GYY5 206 aaPredicted RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 ZNF536O15090 1300 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 FANCGO15287 622 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 MTIF2P46199 727 aaKnown RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 RAD9BQ6WBX8 426 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 DHTKD1Q96HY7 919 aaPredicted RBP15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 WRNIP1Q96S55 665 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 FEM1BQ9UK73 627 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 VAV3Q9UKW4 847 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
CARMIL3-203ENST00000560349 LRRC10BA6NIK2 292 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 ARHGAP6O43182 974 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 ARP10275 920 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 CYP11B2P19099 503 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 VCAM1P19320 739 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 EPS15P42566 896 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 SPAG1Q07617 926 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 Q4G0T1 1027 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 ARSHQ5FYA8 562 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 MUM1L1Q5H9M0 696 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 KCND1Q9NSA2 647 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms