RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
SMAD3-213ENST00000560175 MYL3P08590 195 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 GNPTABQ3T906 1256 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 SESTD1Q86VW0 696 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 DHX37Q8IY37 1157 aaKnown RBP15.18■□□□□ 0.02
SMAD3-213ENST00000560175 RNF26Q9BY78 433 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-213ENST00000560175 GLT8D2Q9H1C3 349 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 PRDM5Q9NQX1 630 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-213ENST00000560175 PCDHA6Q9UN73 950 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 PCDHA8Q9Y5H6 950 aa15.18■□□□□ 0.02
SMAD3-213ENST00000560175 DOCK5Q9H7D0 1870 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 HAS3O00219 553 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 MAFGO15525 162 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 FIBPO43427 364 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 B4GALT4O60513 344 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 FOSP01100 380 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-213ENST00000560175 SCG2P13521 617 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 RAG1P15918 1043 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 UBA1P22314 1058 aaKnown RBP15.17■□□□□ 0.02
SMAD3-213ENST00000560175 DGKDQ16760 1214 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 UBE2SQ16763 222 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 HSDL1Q3SXM5 330 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 GPR153Q6NV75 609 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 ZFP91Q96JP5 570 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-213ENST00000560175 UPF3BQ9BZI7 483 aaKnown RBP15.17■□□□□ 0.02
SMAD3-213ENST00000560175 ZMYND12Q9H0C1 365 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 BCAS3Q9H6U6 928 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 UBIAD1Q9Y5Z9 338 aa15.17■□□□□ 0.02
SMAD3-213ENST00000560175 SMCO2A6NFE2 343 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 SEC24BO95487 1268 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 GGPS1O95749 300 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 F2P00734 622 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 NAPAP54920 295 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 NEDD9Q14511 834 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 CRYGNQ8WXF5 182 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 GPRASP2Q96D09 838 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 TRPV6Q9H1D0 765 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
SMAD3-213ENST00000560175 SPDYE3A6NKU9 549 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
SMAD3-213ENST00000560175 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 ITGB5P18084 799 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 EPHB4P54760 987 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 AP3B2Q13367 1082 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 METTL7BQ6UX53 244 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 C16orf70Q9BSU1 422 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 NOC4LQ9BVI4 516 aaKnown RBP15.15■□□□□ 0.02
SMAD3-213ENST00000560175 PDRG1Q9NUG6 133 aa15.15■□□□□ 0.02
SMAD3-213ENST00000560175 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
SMAD3-213ENST00000560175 KCNA2P16389 499 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 SREBF1P36956 1147 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 ADCY7P51828 1080 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
SMAD3-213ENST00000560175 SHHQ15465 462 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 MCTP2Q6DN12 878 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 C16orf59Q7L2K0 433 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 NLRX1Q86UT6 975 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 GIMAP8Q8ND71 665 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-213ENST00000560175 PHKBQ93100 1093 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 VWCEQ96DN2 955 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 CDHR1Q96JP9 859 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 SPATA33Q96N06 139 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 NCOA5Q9HCD5 579 aaKnown RBP15.14■□□□□ 0.01
SMAD3-213ENST00000560175 JADE2Q9NQC1 790 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
SMAD3-213ENST00000560175 NAP1L2Q9ULW6 460 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-213ENST00000560175 ADAMTS3O15072 1205 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 ATP9AO75110 1047 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 CYP3A4P08684 503 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 HOXC8P31273 242 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 FPGSQ05932 587 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 C9orf50Q5SZB4 431 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 FAM177A1Q8N128 213 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-213ENST00000560175 CCDC12Q8WUD4 166 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-213ENST00000560175 GPR20Q99678 358 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 EHMT1Q9H9B1 1298 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 MLXIPQ9HAP2 919 aa15.13■□□□□ 0.01
SMAD3-213ENST00000560175 TRMT13Q9NUP7 481 aaKnown RBP15.13■□□□□ 0.01
SMAD3-213ENST00000560175 MEIS1O00470 390 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 PFKFB2O60825 505 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 GNA11P29992 359 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 CYP2C18P33260 490 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 PSEN2P49810 448 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 RBL2Q08999 1139 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 C8orf34Q49A92 452 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 CYFIP1Q7L576 1253 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 NIPA1Q7RTP0 329 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 TMEM199Q8N511 208 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 MXRA8Q9BRK3 442 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
SMAD3-213ENST00000560175 ANO3Q9BYT9 981 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 HIPK3Q9H422 1215 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 TPCN1Q9ULQ1 816 aa15.12■□□□□ 0.01
SMAD3-213ENST00000560175 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms