RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 C22orf46C9J442 243 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 F8W031 263 aaPredicted RBP5.06□□□□□ -1.6
CASC4-210ENST00000559550 NTRK1P04629 796 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 CYBBP04839 570 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 RPL11P62913 178 aaKnown RBP5.06□□□□□ -1.6
CASC4-210ENST00000559550 CBX2Q14781 532 aaPredicted RBP5.06□□□□□ -1.6
CASC4-210ENST00000559550 ZNF827Q17R98 1081 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 PAQR3Q6TCH7 311 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 TMC6Q7Z403 805 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 SCUBE1Q8IWY4 988 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 USP33Q8TEY7 942 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 PWWP2AQ96N64 755 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 CDC6Q99741 560 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 KANSL2Q9H9L4 492 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 USP35Q9P2H5 1018 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 PPARGC1AQ9UBK2 798 aaKnown RBP5.06□□□□□ -1.6
CASC4-210ENST00000559550 PALD1Q9ULE6 856 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 SIT1Q9Y3P8 196 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 FSHBP01225 129 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 C6orf222P0C671 652 aaPredicted RBP5.05□□□□□ -1.6
CASC4-210ENST00000559550 KCNC1P48547 511 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 MAPKAPK2P49137 400 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 SLURP1P55000 103 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 PRR5P85299 388 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 NR1I3Q14994 352 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 NFE2L2Q16236 605 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 WWC2Q6AWC2 1192 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 CEP68Q76N32 757 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 LDHDQ86WU2 507 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 Q8N1Y9 231 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 MENTQ9BUN1 341 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 SCAND2PQ9GZW5 306 aaPredicted RBP5.05□□□□□ -1.6
CASC4-210ENST00000559550 BCAS3Q9H6U6 928 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 GPR27Q9NS67 375 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 TRAF6Q9Y4K3 522 aa5.05□□□□□ -1.6
CASC4-210ENST00000559550 C1QTNF3-AMACRE9PGA6 284 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 ABLIM1O14639 778 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 MYO1BO43795 1136 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 SUMO1P63165 101 aaKnown RBP5.04□□□□□ -1.6
CASC4-210ENST00000559550 LSAMPQ13449 338 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 LONRF2Q1L5Z9 754 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 C2orf27AQ580R0 203 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 STYK1Q6J9G0 422 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 CABP7Q86V35 215 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 NETO2Q8NC67 525 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 THAP3Q8WTV1 239 aaPredicted RBP5.04□□□□□ -1.6
CASC4-210ENST00000559550 DCAF4Q8WV16 495 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 KISS1RQ969F8 398 aaPredicted RBP5.04□□□□□ -1.6
CASC4-210ENST00000559550 TRMT2BQ96GJ1 504 aaKnown RBP5.04□□□□□ -1.6
CASC4-210ENST00000559550 TMEM169Q96HH4 297 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 MRFAP1L1Q96HT8 127 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 DHRS4Q9BTZ2 278 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 MRPS23Q9Y3D9 190 aaKnown RBP5.04□□□□□ -1.6
CASC4-210ENST00000559550 PCDHA5Q9Y5H7 936 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 PTCH2Q9Y6C5 1203 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 X6R8D5 127 aa5.04□□□□□ -1.6
CASC4-210ENST00000559550 NCKAP1LP55160 1127 aa5.03□□□□□ -1.6
CASC4-210ENST00000559550 ZNF200P98182 395 aaPredicted RBP5.03□□□□□ -1.6
CASC4-210ENST00000559550 SQSTM1Q13501 440 aa5.03□□□□□ -1.6
CASC4-210ENST00000559550 ZC3H14Q6PJT7 736 aaKnown RBP5.03□□□□□ -1.6
CASC4-210ENST00000559550 LBX2Q6XYB7 198 aa5.03□□□□□ -1.6
CASC4-210ENST00000559550 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
CASC4-210ENST00000559550 CLDND1Q9NY35 253 aa5.03□□□□□ -1.6
CASC4-210ENST00000559550 SGSM2O43147 1006 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 FBLN1P23142 703 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 GTF2A2P52657 109 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 HMGA2P52926 109 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 TMEM62Q0P6H9 643 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 RSPO2Q6UXX9 243 aaPredicted RBP5.02□□□□□ -1.61
CASC4-210ENST00000559550 FERMT3Q86UX7 667 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 RIOX2Q8IUF8 465 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 IPO9Q96P70 1041 aaKnown RBP5.02□□□□□ -1.61
CASC4-210ENST00000559550 JAM3Q9BX67 310 aa5.02□□□□□ -1.61
CASC4-210ENST00000559550 DBR1Q9UK59 544 aaKnown RBP5.02□□□□□ -1.61
CASC4-210ENST00000559550 H7BY64 318 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 SLPIP03973 132 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 GPR85P60893 370 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 VWA3BQ502W6 1294 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 UBXN11Q5T124 520 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 MROH9Q5TGP6 573 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 OLFML2BQ68BL8 750 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 ZSWIM2Q8NEG5 633 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.01□□□□□ -1.61
CASC4-210ENST00000559550 SH3TC2Q8TF17 1288 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 PTPRN2Q92932 1015 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 TSPAN17Q96FV3 270 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 PEX11GQ96HA9 241 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 RNPC3Q96LT9 517 aaKnown RBP5.01□□□□□ -1.61
CASC4-210ENST00000559550 RBM15Q96T37 977 aaKnown RBP eCLIP5.01□□□□□ -1.61
CASC4-210ENST00000559550 ZFYVE21Q9BQ24 234 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 C1QTNF3Q9BXJ4 246 aa5.01□□□□□ -1.61
CASC4-210ENST00000559550 IRS2Q9Y4H2 1338 aa5□□□□□ -1.61
CASC4-210ENST00000559550 BUB1BO60566 1050 aaPredicted RBP5□□□□□ -1.61
CASC4-210ENST00000559550 ASGR2P07307 311 aa5□□□□□ -1.61
CASC4-210ENST00000559550 ATF2P15336 505 aa5□□□□□ -1.61
CASC4-210ENST00000559550 IGFBP6P24592 240 aaPredicted RBP5□□□□□ -1.61
CASC4-210ENST00000559550 GRK2P25098 689 aa5□□□□□ -1.61
CASC4-210ENST00000559550 PMLP29590 882 aa5□□□□□ -1.61
CASC4-210ENST00000559550 GRK3P35626 688 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms