RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 DGKDQ16760 1214 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 TRIM71Q2Q1W2 868 aaKnown RBP10.1□□□□□ -0.79
CLPX-205ENST00000559218 FAM117BQ6P1L5 589 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 CNKSR3Q6P9H4 555 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 TRAF7Q6Q0C0 670 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 C7orf31Q8N865 590 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 ENAHQ8N8S7 591 aaPredicted RBP10.1□□□□□ -0.79
CLPX-205ENST00000559218 RILPL2Q969X0 211 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 FAM122AQ96E09 287 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 IWS1Q96ST2 819 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 ALG1Q9BT22 464 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 LRFN3Q9BTN0 628 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 LNPKQ9C0E8 428 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 RNF41Q9H4P4 317 aaPredicted RBP10.1□□□□□ -0.79
CLPX-205ENST00000559218 JMJD4Q9H9V9 463 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 SUGCTQ9HAC7 445 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 CD320Q9NPF0 282 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 TANC1Q9C0D5 1861 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 B4E1Z4 1266 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 ZNF213O14771 459 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 EIF3JO75822 258 aaKnown RBP10.09□□□□□ -0.79
CLPX-205ENST00000559218 GJB5O95377 273 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 F2P00734 622 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 PSEN1P49768 467 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 RRP1P56182 461 aaKnown RBP10.09□□□□□ -0.79
CLPX-205ENST00000559218 HDAC1Q13547 482 aaPredicted RBP10.09□□□□□ -0.79
CLPX-205ENST00000559218 MFSD10Q14728 455 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 KIAA0753Q2KHM9 967 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 ZNF618Q5T7W0 954 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 ARHGEF16Q5VV41 709 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 FBXO11Q86XK2 927 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 TICAM2Q86XR7 235 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 MCF2L2Q86YR7 1114 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 EMID1Q96A84 441 aaPredicted RBP10.09□□□□□ -0.79
CLPX-205ENST00000559218 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
CLPX-205ENST00000559218 RAD9AQ99638 391 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 KAT14Q9H8E8 782 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 C11orf16Q9NQ32 467 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 PXMP2Q9NR77 195 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 MRVI1Q9Y6F6 885 aa10.09□□□□□ -0.79
CLPX-205ENST00000559218 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 LINC01553A4QN01 128 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 FAM86C2PA6NEL3 165 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 HAS3O00219 553 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 PPP1R11O60927 126 aaPredicted RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 RGS20O76081 388 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 CFBP00751 764 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 NR3C2P08235 984 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 PARP1P09874 1014 aaKnown RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 SDSP20132 328 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 ERVK-21P61565 698 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 PTK7Q13308 1070 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 LAMC2Q13753 1193 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 ASPRV1Q53RT3 343 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLPX-205ENST00000559218 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 IL31RAQ8NI17 732 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 PPTC7Q8NI37 304 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 ZFP91Q96JP5 570 aaPredicted RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 MAF1Q9H063 256 aa10.08□□□□□ -0.8
CLPX-205ENST00000559218 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 MRPL11Q9Y3B7 192 aaKnown RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
CLPX-205ENST00000559218 PTPRSQ13332 1948 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 COL4A4P53420 1690 aaPredicted RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 PARNO95453 639 aaKnown RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 MYCLP12524 364 aaPredicted RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 HOXD8P13378 290 aaPredicted RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 HOXA13P31271 388 aaPredicted RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 HSD17B4P51659 736 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 SP2Q02086 613 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 IKBKEQ14164 716 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 TMEM31Q5JXX7 168 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 MYSM1Q5VVJ2 828 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 DHX37Q8IY37 1157 aaKnown RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
CLPX-205ENST00000559218 TGS1Q96RS0 853 aaKnown RBP10.07□□□□□ -0.8
CLPX-205ENST00000559218 C17orf80Q9BSJ5 609 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 OSBPL7Q9BZF2 842 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
CLPX-205ENST00000559218 WDFY4Q6ZS81 3184 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
CLPX-205ENST00000559218 SNPHO15079 494 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 LGR5O75473 907 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 GGPS1O95749 300 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 KCNA5P22460 613 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 THPOP40225 353 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
CLPX-205ENST00000559218 SLC35G1Q2M3R5 365 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 HSDL1Q3SXM5 330 aa10.06□□□□□ -0.8
CLPX-205ENST00000559218 CCDC178Q5BJE1 867 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms