RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 FUT2Q10981 343 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 RTN1Q16799 776 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 PCNX4Q63HM2 1172 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 PSRC1Q6PGN9 363 aaPredicted RBP17.84■□□□□ 0.45
CSHL1-208ENST00000558609 ZNF365Q70YC5 407 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 ZFP91Q96JP5 570 aaPredicted RBP17.84■□□□□ 0.45
CSHL1-208ENST00000558609 CDH23Q9H251 3354 aa17.83■□□□□ 0.45
CSHL1-208ENST00000558609 CNTNAP5Q8WYK1 1306 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 KLF18A0A0U1RQI7 1052 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 SPATA31C2B4DYI2 1134 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 ACRP10323 421 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 PPP1R13LQ8WUF5 828 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 GPKOWQ92917 476 aaPredicted RBP eCLIP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 SPATA33Q96N06 139 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 CDX2Q99626 313 aaPredicted RBP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 FAM217BQ9NTX9 383 aaPredicted RBP17.83■□□□□ 0.44
CSHL1-208ENST00000558609 PPP4R2Q9NY27 417 aa17.83■□□□□ 0.44
CSHL1-208ENST00000558609 HAS3O00219 553 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 F2P00734 622 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 FGBP02675 491 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 CPA1P15085 419 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 HSDL1Q3SXM5 330 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 ZNF697Q5TEC3 545 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 BLOC1S2Q6QNY1 142 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 HEATR3Q7Z4Q2 680 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
CSHL1-208ENST00000558609 FBXL16Q8N461 479 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 HERVK_113Q902F9 699 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 KATNAL1Q9BW62 490 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 SEMA6BQ9H3T3 888 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
CSHL1-208ENST00000558609 GOLGA8AA7E2F4 631 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 GOLGA8BA8MQT2 603 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 PITPNM1O00562 1244 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 FIBPO43427 364 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 CDC27P30260 824 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 PSEN2P49810 448 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 CHMP4BP1P59074 171 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 FGD1P98174 961 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 SEMA3FQ13275 785 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 NEDD9Q14511 834 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 PTGISQ16647 500 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 GDF6Q6KF10 455 aaPredicted RBP17.81■□□□□ 0.44
CSHL1-208ENST00000558609 Q6ZUG5 572 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 TEX2Q8IWB9 1127 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 VWCEQ96DN2 955 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 SCLYQ96I15 445 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 RTEL1Q9NZ71 1219 aa17.81■□□□□ 0.44
CSHL1-208ENST00000558609 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
CSHL1-208ENST00000558609 SORBS3O60504 671 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 PFKMP08237 780 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 ZNF286BP0CG31 522 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 PSMA5P28066 241 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 BFSP2Q13515 415 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 MFSD10Q14728 455 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 UBE2SQ16763 222 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 KIAA0753Q2KHM9 967 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 PPP1R18Q6NYC8 613 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 C7orf31Q8N865 590 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 CTAGE1Q96RT6 745 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 SENP7Q9BQF6 1050 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 AGXT2Q9BYV1 514 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 TTYH1Q9H313 450 aaPredicted RBP17.8■□□□□ 0.44
CSHL1-208ENST00000558609 BCAS3Q9H6U6 928 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 HDAC6Q9UBN7 1215 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 GTF2IRD1Q9UHL9 959 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 NOD1Q9Y239 953 aa17.8■□□□□ 0.44
CSHL1-208ENST00000558609 TMEM265A0A087WTH1 108 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 CCDC196A0A1B0GTZ2 297 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 hCG_1984214I3L0E3 225 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 RFC2P35250 354 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 APOBRQ0VD83 1088 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 METTL7BQ6UX53 244 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 NLRX1Q86UT6 975 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 ZNF713Q8N859 430 aaPredicted RBP17.79■□□□□ 0.44
CSHL1-208ENST00000558609 RETREG2Q8NC44 543 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 BRF1Q92994 677 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 C16orf70Q9BSU1 422 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 ALG1Q9BT22 464 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 MTIF3Q9H2K0 278 aaKnown RBP17.79■□□□□ 0.44
CSHL1-208ENST00000558609 PCDHA6Q9UN73 950 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 PCDHA8Q9Y5H6 950 aa17.79■□□□□ 0.44
CSHL1-208ENST00000558609 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 ADD1P35611 737 aaKnown RBP17.78■□□□□ 0.44
CSHL1-208ENST00000558609 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.44
CSHL1-208ENST00000558609 NAPAP54920 295 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 TYW1BQ6NUM6 668 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
CSHL1-208ENST00000558609 MAFAQ8NHW3 353 aaPredicted RBP17.78■□□□□ 0.44
CSHL1-208ENST00000558609 CAGE1Q8TC20 777 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms