RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SCN10AQ9Y5Y9 1956 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 TET1Q8NFU7 2136 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 STXBP3O00186 592 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 TECTAO75443 2155 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 ZMYND10O75800 440 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 MMP3P08254 477 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 CALML3P27482 149 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 TFAP4Q01664 338 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 DLX2Q07687 328 aaPredicted RBP7.99□□□□□ -1.13
LRRC28-207ENST00000558500 SMAD4Q13485 552 aaKnown RBP7.99□□□□□ -1.13
LRRC28-207ENST00000558500 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 RASGRP2Q7LDG7 609 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 FBXL6Q8N531 539 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 C7orf31Q8N865 590 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 DBF4BQ8NFT6 615 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 WNT8BQ93098 351 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 OSBP2Q969R2 916 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 MPHOSPH6Q99547 160 aaKnown RBP7.99□□□□□ -1.13
LRRC28-207ENST00000558500 TANC1Q9C0D5 1861 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 RANBP17Q9H2T7 1088 aaKnown RBP7.99□□□□□ -1.13
LRRC28-207ENST00000558500 HDAC6Q9UBN7 1215 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 EMSYQ7Z589 1322 aa7.99□□□□□ -1.13
LRRC28-207ENST00000558500 RIF1Q5UIP0 2472 aaKnown RBP7.98□□□□□ -1.13
LRRC28-207ENST00000558500 GH1P01241 217 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 GNAT2P19087 354 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 CASTP20810 708 aaKnown RBP7.98□□□□□ -1.13
LRRC28-207ENST00000558500 PSEN2P49810 448 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 ZXDAP98168 799 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 HYAL1Q12794 435 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 CCDC62Q6P9F0 684 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 RNF207Q6ZRF8 634 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 DNERQ8NFT8 737 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 CLEC4DQ8WXI8 215 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 ATOH1Q92858 354 aaPredicted RBP7.98□□□□□ -1.13
LRRC28-207ENST00000558500 TOP1MTQ969P6 601 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 YME1L1Q96TA2 773 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 LARP6Q9BRS8 491 aaKnown RBP7.98□□□□□ -1.13
LRRC28-207ENST00000558500 IRF2BPLQ9H1B7 796 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 STX8Q9UNK0 236 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 CFAP54Q96N23 3096 aa7.98□□□□□ -1.13
LRRC28-207ENST00000558500 MYH8P13535 1937 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 BAZ2AQ9UIF9 1905 aaKnown RBP7.97□□□□□ -1.13
LRRC28-207ENST00000558500 GVINP1Q7Z2Y8 2422 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 RSPH10B2B2RC85 870 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 B4DLN1 442 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
LRRC28-207ENST00000558500 HAS3O00219 553 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 GPAA1O43292 621 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 RAB11FIP3O75154 756 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 TBX10O75333 385 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 APPP05067 770 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 RSPH10BP0C881 870 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 SLC16A2P36021 539 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 MRPL12P52815 198 aaKnown RBP7.97□□□□□ -1.13
LRRC28-207ENST00000558500 RPS6P62753 249 aaKnown RBP7.97□□□□□ -1.13
LRRC28-207ENST00000558500 ZNF200P98182 395 aaPredicted RBP7.97□□□□□ -1.13
LRRC28-207ENST00000558500 ARHGAP1Q07960 439 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 DGKDQ16760 1214 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 LY6KQ17RY6 165 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 CCDC96Q2M329 555 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 PLEKHG4Q58EX7 1191 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 SYDE2Q5VT97 1194 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 BTNL9Q6UXG8 535 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 CHST3Q7LGC8 479 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 ERMP1Q7Z2K6 904 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 DCAF4Q8WV16 495 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 APPBP2Q92624 585 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 ALG1Q9BT22 464 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 LMAN2LQ9H0V9 348 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 IL17RBQ9NRM6 502 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 CD207Q9UJ71 328 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 TRIOO75962 3097 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
LRRC28-207ENST00000558500 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 LOC730098B7Z3J9 87 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 PROB1E7EW31 1015 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 C5orf67F2Z3F1 127 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 GRM6O15303 877 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 LINC01565O15544 149 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 NMT2O60551 498 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 UPP2O95045 317 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 EYA4O95677 639 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 F2P00734 622 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 RB1P06400 928 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 SLC3A2P08195 630 aaKnown RBP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 AVPR2P30518 371 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 CTNNB1P35222 781 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 GTF2F1P35269 517 aaKnown RBP eCLIP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 BMPR1AP36894 532 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 THPOP40225 353 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 VCPP55072 806 aaKnown RBP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 SIGLEC14Q08ET2 396 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 ADAM15Q13444 863 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 HIC1Q14526 733 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 CBX2Q14781 532 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms