RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 TGFB3P10600 412 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 ACLYP53396 1101 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 ARHGAP4P98171 946 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 NLRX1Q86UT6 975 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 PCSK9Q8NBP7 692 aaKnown RBP14.27□□□□□ -0.13
LRRC28-206ENST00000558471 DAGLBQ8NCG7 672 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 MOXD2PA6NHM9 499 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 FIBPO43427 364 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 CYP3A4P08684 503 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 FOSBP53539 338 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 ARHGAP1Q07960 439 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 MYSM1Q5VVJ2 828 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
LRRC28-206ENST00000558471 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 AFG1LQ8WV93 481 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 GPRASP2Q96D09 838 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 MXRA8Q9BRK3 442 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 JADE2Q9NQC1 790 aa14.26□□□□□ -0.13
LRRC28-206ENST00000558471 A0A1W2PQ45 241 aaPredicted RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 A6NJR5 290 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 EDIL3O43854 480 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 SORBS3O60504 671 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 ATP9AO75110 1047 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 GGPS1O95749 300 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 UBA1P22314 1058 aaKnown RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 CPT1AP50416 773 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 HMGN5P82970 282 aaKnown RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 LRRC26Q2I0M4 334 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 CEP55Q53EZ4 464 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 KRT40Q6A162 431 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 CXCL17Q6UXB2 119 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 SLC39A5Q6ZMH5 540 aa14.25□□□□□ -0.13
LRRC28-206ENST00000558471 EMID1Q96A84 441 aaPredicted RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 TNRC18O15417 2968 aaPredicted RBP14.25□□□□□ -0.13
LRRC28-206ENST00000558471 FAM86B1E9PN63 330 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 MEIS1O00470 390 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 MAFGO15525 162 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 ZEB2O60315 1214 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 FAM86B2P0C5J1 330 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 ARP10275 920 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 ZNF76P36508 570 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 MTMR1Q13613 665 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 NEDD9Q14511 834 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 FAM184AQ8NB25 1140 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 TBCKQ8TEA7 893 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 DPF3Q92784 378 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 CDHR1Q96JP9 859 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 GLT1D1Q96MS3 346 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 SENP7Q9BQF6 1050 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 STARD7Q9NQZ5 370 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 KCNH7Q9NS40 1196 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 PDE4DIPQ5VU43 2346 aa14.24□□□□□ -0.13
LRRC28-206ENST00000558471 IGLV3-22A0A075B6J6 115 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 MMP1P03956 469 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 MMP3P08254 477 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 MYL3P08590 195 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 KCNA2P16389 499 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 CIITAP33076 1130 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 KRT2P35908 639 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 USP11P51784 963 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 PURAQ00577 322 aaKnown RBP14.23□□□□□ -0.13
LRRC28-206ENST00000558471 GUCY1B3Q02153 619 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 TRIM29Q14134 588 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 HSDL1Q3SXM5 330 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 BRDTQ58F21 947 aaPredicted RBP14.23□□□□□ -0.13
LRRC28-206ENST00000558471 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 NIPA1Q7RTP0 329 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 KRT25Q7Z3Z0 450 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 VTI1AQ96AJ9 217 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 POLR3EQ9NVU0 708 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 TELO2Q9Y4R8 837 aa14.23□□□□□ -0.13
LRRC28-206ENST00000558471 ELP1O95163 1332 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 KPNA6O60684 536 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 CABYRO75952 493 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 PSMC6P62333 389 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 NR5A1Q13285 461 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 SNX17Q15036 470 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.13
LRRC28-206ENST00000558471 INF2Q27J81 1249 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 EARS2Q5JPH6 523 aaKnown RBP14.22□□□□□ -0.13
LRRC28-206ENST00000558471 METTL7BQ6UX53 244 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 PLA2G4DQ86XP0 818 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 GIMAP8Q8ND71 665 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-206ENST00000558471 PPTC7Q8NI37 304 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 TNFRSF25Q93038 417 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 C8orf76Q96K31 380 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 SPATA33Q96N06 139 aa14.22□□□□□ -0.13
LRRC28-206ENST00000558471 AGO4Q9HCK5 861 aaKnown RBP14.22□□□□□ -0.13
LRRC28-206ENST00000558471 DNAH12Q6ZR08 3092 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 GRIN2DO15399 1336 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms