RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 NPY5RQ15761 445 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 OR2W6PQ8NHA6 318 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 MAGOHBQ96A72 148 aaKnown RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 CALR3Q96L12 384 aaKnown RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PALMO75781 387 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 NEFHP12036 1026 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 NQO1P15559 274 aaKnown RBP12.31□□□□□ -0.44
PCAT29-201ENST00000558411 RPS6KA3P51812 740 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 ZNF131P52739 623 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 LMNB2Q03252 620 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 TRADDQ15628 312 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 CCDC38Q502W7 563 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
PCAT29-201ENST00000558411 MFN1Q8IWA4 741 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
PCAT29-201ENST00000558411 CUEDC2Q9H467 287 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 CCDC134Q9H6E4 229 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 FBXL5Q9UKA1 691 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 DOCK2Q92608 1830 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 BCORQ6W2J9 1755 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 LRRC53A6NM62 1247 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 ABLIM1O14639 778 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 BUB1O43683 1085 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 IDH1O75874 414 aaKnown RBP12.31□□□□□ -0.44
PCAT29-201ENST00000558411 FERP16591 822 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 SLC1A4P43007 532 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 RAB27AP51159 221 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 SLC5A9Q2M3M2 681 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 PDXDC1Q6P996 788 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 TRPM8Q7Z2W7 1104 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 SYN2Q92777 582 aaPredicted RBP12.31□□□□□ -0.44
PCAT29-201ENST00000558411 ZBTB10Q96DT7 871 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 PBKQ96KB5 322 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 L3MBTL1Q9Y468 752 aa12.31□□□□□ -0.44
PCAT29-201ENST00000558411 SPATA31A3Q5VYP0 1347 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 CTNND1O60716 968 aaKnown RBP12.3□□□□□ -0.44
PCAT29-201ENST00000558411 GNAT2P19087 354 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 SLC30A9Q6PML9 568 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 TBC1D1Q86TI0 1168 aaPredicted RBP12.3□□□□□ -0.44
PCAT29-201ENST00000558411 HOOK3Q86VS8 718 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 STAG2Q8N3U4 1231 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 ACTRT1Q8TDG2 376 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
PCAT29-201ENST00000558411 BAP1Q92560 729 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 NACAP1Q9BZK3 213 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 NSRP1Q9H0G5 558 aaKnown RBP12.3□□□□□ -0.44
PCAT29-201ENST00000558411 PANK4Q9NVE7 773 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 SAMD15Q9P1V8 674 aa12.3□□□□□ -0.44
PCAT29-201ENST00000558411 ENO4A6NNW6 628 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 CCDC188H7C350 402 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 STXBP3O00186 592 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 DIAPH2O60879 1101 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 PHKG2P15735 406 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 GFPT1Q06210 699 aaPredicted RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 SEC23AQ15436 765 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 KRT71Q3SY84 523 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 TMC3Q7Z5M5 1100 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 KLHL7Q8IXQ5 586 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 ANKRD13CQ8N6S4 541 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 C4orf32Q8N8J7 132 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 GBP7Q8N8V2 638 aaPredicted RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 SEC14L1Q92503 715 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 TAF4BQ92750 862 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 CCSER1Q9C0I3 900 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 ZFATQ9P243 1243 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 STRCQ7RTU9 1775 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 RREB1Q92766 1687 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 GSG1L2A8MUP6 293 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 BTNL10A8MVZ5 291 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 F8VZ95 297 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 BACH1O14867 736 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 AP1G2O75843 785 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 WFS1O76024 890 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 LINGO3P0C6S8 592 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 CALM1P0DP23 149 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 CALM2P0DP24 149 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 CALM3P0DP25 149 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 MCM7P33993 719 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 MAN2A1Q16706 1144 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 HGSNATQ68CP4 663 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 GIGYF2Q6Y7W6 1299 aaKnown RBP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
PCAT29-201ENST00000558411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCAT29-201ENST00000558411 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms