RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 SPPL3Q8TCT6 385 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ATP8B4Q8TF62 1192 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 SEPT8Q92599 483 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 S1PR5Q9H228 398 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 TLE6Q9H808 572 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ARMT1Q9H993 441 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RWDD3Q9Y3V2 267 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 MMP3P08254 477 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PDE6AP16499 860 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 STK11IPQ8N1F8 1099 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 POF1BQ8WVV4 589 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CCDC8Q9H0W5 538 aaPredicted RBP11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 RC3H2Q9HBD1 1191 aaKnown RBP11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CDV3Q9UKY7 258 aaKnown RBP11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 FRYQ5TBA9 3013 aa11.52□□□□□ -0.57
IGKV2D-28-202ENST00000558026 TMEM232C9JQI7 657 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ZIC2O95409 532 aaPredicted RBP11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PSEN2P49810 448 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 BTG3Q14201 252 aaPredicted RBP11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 TKFCQ3LXA3 575 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PLVAPQ9BX97 442 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 GPR108Q9NPR9 543 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CTSHP09668 335 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ZNF286BP0CG31 522 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PDE4DQ08499 809 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 DMWDQ09019 674 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SYCE2Q6PIF2 218 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 POMKQ9H5K3 350 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ADD3Q9UEY8 706 aaKnown RBP11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 LIMD1Q9UGP4 676 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 MRPL42Q9Y6G3 142 aaKnown RBP11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ASPMQ8IZT6 3477 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 MYH7BA7E2Y1 1941 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SPEGQ15772 3267 aa11.5□□□□□ -0.57
IGKV2D-28-202ENST00000558026 TCRBV5S4A2TA0A5A2 114 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 NFIBO00712 420 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ZZEF1O43149 2961 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PPFIA3O75145 1194 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 BMP3P12645 472 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 RASA1P20936 1047 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SDHBP21912 280 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 TECP42680 631 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ARHGAP1Q07960 439 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 IKQ13123 557 aaPredicted RBP11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 MFSD10Q14728 455 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 KIAA0753Q2KHM9 967 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PPM1JQ5JR12 505 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 P2RX5Q93086 422 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 RTP3Q9BQQ7 232 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ERVK-5Q9HDB9 667 aa11.49□□□□□ -0.57
IGKV2D-28-202ENST00000558026 MBD4O95243 580 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 FDX1P10109 184 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CASTP20810 708 aaKnown RBP11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 STAT2P52630 851 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 DUSP6Q16828 381 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 LY6KQ17RY6 165 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SLFN13Q68D06 897 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ANKRD54Q6NXT1 300 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CCDC62Q6P9F0 684 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SERINC5Q86VE9 423 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 DHX37Q8IY37 1157 aaKnown RBP11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 MICAL1Q8TDZ2 1067 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 ATP8A2Q9NTI2 1148 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 NCDNQ9UBB6 729 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CACNA1IQ9P0X4 2223 aa11.48□□□□□ -0.57
IGKV2D-28-202ENST00000558026 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 TTC3P53804 2025 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 IGKV6D-41A0A0C4DH26 115 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 PTPDC1A2A3K4 754 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 HAS3O00219 553 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SP9P0CG40 484 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CALML3P27482 149 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CTR9Q6PD62 1173 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 TMED8Q6PL24 325 aaPredicted RBP11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 RPAP2Q8IXW5 612 aaPredicted RBP11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SIX5Q8N196 739 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 CEP95Q96GE4 821 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 RTKNQ9BST9 563 aa11.47□□□□□ -0.57
IGKV2D-28-202ENST00000558026 SOBPA7XYQ1 873 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms