RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 RBM8AQ9Y5S9 174 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 NOP56O00567 594 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 CYTH3O43739 400 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 EFCAB14O75071 495 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 DDAH1O94760 285 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 CALM1P0DP23 149 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 CALM2P0DP24 149 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 CALM3P0DP25 149 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 MYOGP15173 224 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 CCDC85BQ15834 202 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 XRRA1Q6P2D8 792 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 HERC6Q8IVU3 1022 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 IL27Q8NEV9 243 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 ZBED2Q9BTP6 218 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
SNRPA1-204ENST00000558020 ABHD14A-ACY1A0A1B0GW23 586 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 CCDC69A6NI79 296 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 HAS3O00219 553 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 GTPBP6O43824 516 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 RGS20O76081 388 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 CA3P07451 260 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 ZNF286BP0CG31 522 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 CKBP12277 381 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 HOXD8P13378 290 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 RBL2Q08999 1139 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 IKBKEQ14164 716 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 ADGRE1Q14246 886 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 NEDD9Q14511 834 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 HSDL1Q3SXM5 330 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 CNKSR3Q6P9H4 555 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 ZNF654Q8IZM8 581 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 USP38Q8NB14 1042 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 SMARCC2Q8TAQ2 1214 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 PIBF1Q8WXW3 757 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 USP26Q9BXU7 913 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 SENP2Q9HC62 589 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 THEGQ9P2T0 379 aa15.71■□□□□ 0.11
SNRPA1-204ENST00000558020 MYH7BA7E2Y1 1941 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 H3BRB1 525 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 PRC1O43663 620 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 TLL1O43897 1013 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 GNAT1P11488 350 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 MRPS5P82675 430 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 MB21D2Q8IYB1 491 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 GIMAP8Q8ND71 665 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 TUT1Q9H6E5 874 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 LY9Q9HBG7 655 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
SNRPA1-204ENST00000558020 EMSYQ7Z589 1322 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 VCANP13611 3396 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 BAZ2BQ9UIF8 2168 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 SCN5AQ14524 2016 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 SPATA31C2B4DYI2 1134 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 PIK3CDO00329 1044 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 FIBPO43427 364 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 CXCL10P02778 98 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 UBA1P22314 1058 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 ICAM3P32942 547 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 ANTXR2P58335 489 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 SP2Q02086 613 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 AAK1Q2M2I8 961 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 SLC35G1Q2M3R5 365 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 NLRX1Q86UT6 975 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 ASB2Q96Q27 587 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 GBF1Q92538 1859 aa15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 TRIP12Q14669 1992 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-204ENST00000558020 C17orf102A2RUQ5 167 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 SORBS3O60504 671 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 POU3F3P20264 500 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 LIFRP42702 1097 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 RNF20Q5VTR2 975 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 METTL7BQ6UX53 244 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 ATP6V0A1Q93050 837 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 CDHR1Q96JP9 859 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 C16orf70Q9BSU1 422 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 ZNF215Q9UL58 517 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 SLC12A7Q9Y666 1083 aa15.68■□□□□ 0.1
SNRPA1-204ENST00000558020 CHD7Q9P2D1 2997 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 THPOP40225 353 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 WDR5P61964 334 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 MRPS9P82933 396 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 TAP1Q03518 808 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 ZNF618Q5T7W0 954 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 SERINC5Q86VE9 423 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 MICALL1Q8N3F8 863 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 ARNTL2Q8WYA1 636 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 ZFP91Q96JP5 570 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 RAD9AQ99638 391 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 ESYT1Q9BSJ8 1104 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms