RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 EPOPA6NHQ4 379 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
NEK9-211ENST00000557673 EFCAB14O75071 495 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 WTAPQ15007 396 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 LRRC8DQ7L1W4 858 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 C7orf31Q8N865 590 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 SYTL5Q8TDW5 730 aaPredicted RBP19.23■□□□□ 0.67
NEK9-211ENST00000557673 TMEM87BQ96K49 555 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 NECAB3Q96P71 396 aaPredicted RBP19.23■□□□□ 0.67
NEK9-211ENST00000557673 LY9Q9HBG7 655 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 LMCD1Q9NZU5 365 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 MAD2L2Q9UI95 211 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 XIRP2A4UGR9 3374 aa19.23■□□□□ 0.67
NEK9-211ENST00000557673 ABHD14A-ACY1A0A1B0GW23 586 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 KLRF2D3W0D1 207 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 EIF3JO75822 258 aaKnown RBP19.22■□□□□ 0.67
NEK9-211ENST00000557673 HMGB1P09429 215 aaKnown RBP19.22■□□□□ 0.67
NEK9-211ENST00000557673 ANAPC15P60006 121 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 WDR5P61964 334 aaKnown RBP19.22■□□□□ 0.67
NEK9-211ENST00000557673 ARHGAP1Q07960 439 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 RBL2Q08999 1139 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 GRB10Q13322 594 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 LAMC2Q13753 1193 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 ARHGEF16Q5VV41 709 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 GDF6Q6KF10 455 aaPredicted RBP19.22■□□□□ 0.67
NEK9-211ENST00000557673 CNKSR3Q6P9H4 555 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 DHX32Q7L7V1 743 aaKnown RBP19.22■□□□□ 0.67
NEK9-211ENST00000557673 IGDCC4Q8TDY8 1250 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 EMID1Q96A84 441 aaPredicted RBP19.22■□□□□ 0.67
NEK9-211ENST00000557673 TAAR1Q96RJ0 339 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 GTF2IRD1Q9UHL9 959 aa19.22■□□□□ 0.67
NEK9-211ENST00000557673 PALM3A6NDB9 673 aaPredicted RBP19.21■□□□□ 0.67
NEK9-211ENST00000557673 PLA2G5P39877 138 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
NEK9-211ENST00000557673 GRM4Q14833 912 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 FBXO11Q86XK2 927 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 TBC1D5Q92609 795 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 KAT2BQ92831 832 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 FAM122AQ96E09 287 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 IL17RAQ96F46 866 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 TCEANC2Q96MN5 208 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 RAD9AQ99638 391 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 LRRC2Q9BYS8 371 aa19.21■□□□□ 0.67
NEK9-211ENST00000557673 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
NEK9-211ENST00000557673 TANC1Q9C0D5 1861 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 CXCL10P02778 98 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 CKBP12277 381 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 CPA1P15085 419 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 PSMA5P28066 241 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 IKBKEQ14164 716 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 SLC35G1Q2M3R5 365 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 KRT40Q6A162 431 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 BLOC1S2Q6QNY1 142 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 PPTC7Q8NI37 304 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 CTAGE1Q96RT6 745 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 TM6SF1Q9BZW5 370 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
NEK9-211ENST00000557673 TCF20Q9UGU0 1960 aaKnown RBP19.2■□□□□ 0.66
NEK9-211ENST00000557673 REV3LO60673 3130 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 PPP1R11O60927 126 aaPredicted RBP19.19■□□□□ 0.66
NEK9-211ENST00000557673 ARHGEF15O94989 841 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 RPS6KB1P23443 525 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 LIFRP42702 1097 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 PSEN2P49810 448 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 TROAPQ12815 778 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 PTK7Q13308 1070 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 KCNV1Q6PIU1 500 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 DHX37Q8IY37 1157 aaKnown RBP19.19■□□□□ 0.66
NEK9-211ENST00000557673 MTMR8Q96EF0 704 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 MAP3K20Q9NYL2 800 aaKnown RBP19.19■□□□□ 0.66
NEK9-211ENST00000557673 HDAC6Q9UBN7 1215 aa19.19■□□□□ 0.66
NEK9-211ENST00000557673 BAZ2BQ9UIF8 2168 aaKnown RBP19.19■□□□□ 0.66
NEK9-211ENST00000557673 GJB5O95377 273 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 NR3C2P08235 984 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 EIF2AK2P19525 551 aaKnown RBP19.18■□□□□ 0.66
NEK9-211ENST00000557673 MFSD10Q14728 455 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 GPNMBQ14956 572 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 CATIPQ7Z7H3 387 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 SGMS1Q86VZ5 419 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 DHX38Q92620 1227 aaKnown RBP19.18■□□□□ 0.66
NEK9-211ENST00000557673 TGS1Q96RS0 853 aaKnown RBP19.18■□□□□ 0.66
NEK9-211ENST00000557673 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 AMNQ9BXJ7 453 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 ZSWIM6Q9HCJ5 1215 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 PXMP2Q9NR77 195 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 COL20A1Q9P218 1284 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 ARIH1Q9Y4X5 557 aaPredicted RBP19.18■□□□□ 0.66
NEK9-211ENST00000557673 TET1Q8NFU7 2136 aa19.18■□□□□ 0.66
NEK9-211ENST00000557673 ZBTB5O15062 677 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 LPXNO60711 386 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 NBNO60934 754 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 PPFIA4O75335 1185 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 DDAH1O94760 285 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 F2P00734 622 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 CFBP00751 764 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 KIAA0753Q2KHM9 967 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 ZNF654Q8IZM8 581 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 SAMD3Q8N6K7 520 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms