RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 IRX3P78415 501 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-233ENST00000557529 TREML2Q5T2D2 321 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 NCAPH2Q6IBW4 605 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 CNNM4Q6P4Q7 775 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 SLC30A10Q6XR72 485 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 LBX2Q6XYB7 198 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 CHST13Q8NET6 341 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 RIT2Q99578 217 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 NUDT12Q9BQG2 462 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 AGTPBP1Q9UPW5 1226 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 RIPK3Q9Y572 518 aa13.98□□□□□ -0.17
SHMT2-233ENST00000557529 RBBP6Q7Z6E9 1792 aaKnown RBP13.98□□□□□ -0.17
SHMT2-233ENST00000557529 LOC285556D6RIA3 1793 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PVALEFA0A1B0GWK0 134 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 KLRC4O43908 158 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 GAS7O60861 476 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PSMD10O75832 226 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 RHOBTB3O94955 611 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 RPA1P27694 616 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PPP1R2P41236 205 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 ASIC1P78348 528 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PPP2R5CQ13362 524 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-233ENST00000557529 MCM6Q14566 821 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PLS1Q14651 629 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 KMT5BQ4FZB7 885 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 OPTNQ96CV9 577 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 MRFAP1L1Q96HT8 127 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 ZNF577Q9BSK1 485 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 POLR3CQ9BUI4 534 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-233ENST00000557529 TEKT3Q9BXF9 490 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 BMP2KQ9NSY1 1161 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-233ENST00000557529 EXOC1Q9NV70 894 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 FBXO40Q9UH90 709 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 UBIAD1Q9Y5Z9 338 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PTPRFP10586 1907 aa13.97□□□□□ -0.17
SHMT2-233ENST00000557529 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 TPM3P06753 285 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 MUTP22033 750 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 SNAPC2Q13487 334 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 STIM1Q13586 685 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 PGM5Q15124 567 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 MAP1SQ66K74 1059 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-233ENST00000557529 OTOP1Q7RTM1 612 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 SLC10A4Q96EP9 437 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 UIMC1Q96RL1 719 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 JADE2Q9NQC1 790 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 KIAA1024Q9UPX6 916 aa13.96□□□□□ -0.17
SHMT2-233ENST00000557529 POTEB3A0JP26 581 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 IPO5O00410 1097 aaKnown RBP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 MED24O75448 989 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 ARP10275 920 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 ITGB5P18084 799 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 OSBPP22059 807 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 COPB2P35606 906 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 FMR1Q06787 632 aaKnown RBP eCLIP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 ECM1Q16610 540 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 SPATA1Q5VX52 437 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 POTEBQ6S5H4 581 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 UNC13DQ70J99 1090 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 RIOX2Q8IUF8 465 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 GIMAP8Q8ND71 665 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 IL31RAQ8NI17 732 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 NSUN6Q8TEA1 469 aaKnown RBP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 PDCD2LQ9BRP1 358 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 ASCC2Q9H1I8 757 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-233ENST00000557529 TUFT1Q9NNX1 390 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 FANCLQ9NW38 375 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 NFE2L3Q9Y4A8 694 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 SYNRGQ9UMZ2 1314 aa13.96□□□□□ -0.18
SHMT2-233ENST00000557529 PFASO15067 1338 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 MYMKA6NI61 221 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 TRAF5O00463 557 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 CBFA2T2O43439 604 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 PLA2G4BP0C869 781 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 CD44P16070 742 aaKnown RBP13.95□□□□□ -0.18
SHMT2-233ENST00000557529 CCND2P30279 289 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 HERVK_113P62684 666 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
SHMT2-233ENST00000557529 PDE4DQ08499 809 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 PAK1Q13153 545 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 MTMR1Q13613 665 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 KLHL10Q6JEL2 608 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 KCNK18Q7Z418 384 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 CATSPER3Q86XQ3 398 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 SMYD4Q8IYR2 804 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-233ENST00000557529 NEK9Q8TD19 979 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
SHMT2-233ENST00000557529 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms