RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 DSCC1Q9BVC3 393 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 SEZ6LQ9BYH1 1024 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 JMJD4Q9H9V9 463 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 MSRAQ9UJ68 235 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 SLC4A7Q9Y6M7 1214 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 ABCB11O95342 1321 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 REV3LO60673 3130 aa10.56□□□□□ -0.72
NPC2-209ENST00000557510 ZBBXA8MT70 800 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 NKRFO15226 690 aaKnown RBP eCLIP10.55□□□□□ -0.72
NPC2-209ENST00000557510 PPP1R11O60927 126 aaPredicted RBP10.55□□□□□ -0.72
NPC2-209ENST00000557510 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
NPC2-209ENST00000557510 GSPT1P15170 499 aaKnown RBP10.55□□□□□ -0.72
NPC2-209ENST00000557510 CCDC85BQ15834 202 aaPredicted RBP10.55□□□□□ -0.72
NPC2-209ENST00000557510 ASPRV1Q53RT3 343 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 NFRKBQ6P4R8 1299 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 CHST3Q7LGC8 479 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 KAT2BQ92831 832 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 GAS2L1Q99501 681 aaPredicted RBP10.55□□□□□ -0.72
NPC2-209ENST00000557510 SENP2Q9HC62 589 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 PNMA2Q9UL42 364 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 TAF6LQ9Y6J9 622 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 MUC3AQ02505 3323 aa10.55□□□□□ -0.72
NPC2-209ENST00000557510 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 EPOPA6NHQ4 379 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 RFXAPO00287 272 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 MMP3P08254 477 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 IQCF3P0C7M6 154 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 SUPT20HL2P0C7V6 817 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 ATP2A2P16615 1042 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 EIF2AK2P19525 551 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 IGFBP4P22692 258 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 BECN1Q14457 450 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 GPNMBQ14956 572 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 SEC23AQ15436 765 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 IMMTQ16891 758 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 GDF6Q6KF10 455 aaPredicted RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 SPRED2Q7Z698 418 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 FBXO11Q86XK2 927 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 RPUSD2Q8IZ73 545 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 IL31RAQ8NI17 732 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 RMDN3Q96TC7 470 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 MTIF3Q9H2K0 278 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 SLC28A3Q9HAS3 691 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
NPC2-209ENST00000557510 RAD50Q92878 1312 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 TRANK1O15050 2925 aa10.54□□□□□ -0.72
NPC2-209ENST00000557510 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
NPC2-209ENST00000557510 HIP1O00291 1037 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 SORBS3O60504 671 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 RGS20O76081 388 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 CFBP00751 764 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 GH1P01241 217 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 CA3P07451 260 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 PTH1RQ03431 593 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 PTGISQ16647 500 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 TCTN1Q2MV58 587 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 BRDTQ58F21 947 aaPredicted RBP10.53□□□□□ -0.72
NPC2-209ENST00000557510 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
NPC2-209ENST00000557510 NSUN6Q8TEA1 469 aaKnown RBP10.53□□□□□ -0.72
NPC2-209ENST00000557510 DHX38Q92620 1227 aaKnown RBP10.53□□□□□ -0.72
NPC2-209ENST00000557510 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 MPHOSPH6Q99547 160 aaKnown RBP10.53□□□□□ -0.72
NPC2-209ENST00000557510 UBAC1Q9BSL1 405 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 KRT23Q9C075 422 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 KDM4CQ9H3R0 1056 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 CERS4Q9HA82 394 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 PXMP2Q9NR77 195 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 PCDHA11Q9Y5I1 949 aa10.53□□□□□ -0.72
NPC2-209ENST00000557510 B4DLN1 442 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 KPNA6O60684 536 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 NR3C2P08235 984 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 ZNF286BP0CG31 522 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 HOXA13P31271 388 aaPredicted RBP10.52□□□□□ -0.73
NPC2-209ENST00000557510 HSD17B4P51659 736 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 MRPL12P52815 198 aaKnown RBP10.52□□□□□ -0.73
NPC2-209ENST00000557510 PTPN11Q06124 597 aaPredicted RBP10.52□□□□□ -0.73
NPC2-209ENST00000557510 STXBP2Q15833 593 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 IFIT1BQ5T764 474 aaKnown RBP10.52□□□□□ -0.73
NPC2-209ENST00000557510 TTC22Q5TAA0 569 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 ARHGEF16Q5VV41 709 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 KRT40Q6A162 431 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 STOX1Q6ZVD7 989 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 MCF2L2Q86YR7 1114 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 ZNF454Q8N9F8 522 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 GPKOWQ92917 476 aaPredicted RBP eCLIP10.52□□□□□ -0.73
NPC2-209ENST00000557510 WNT8BQ93098 351 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 CTNNA3Q9UI47 895 aa10.52□□□□□ -0.73
NPC2-209ENST00000557510 MRPL11Q9Y3B7 192 aaKnown RBP10.52□□□□□ -0.73
NPC2-209ENST00000557510 MICAL3Q7RTP6 2002 aa10.51□□□□□ -0.73
NPC2-209ENST00000557510 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms