RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 PIEZO1Q92508 2521 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 A0A0U1RQG5 324 aaPredicted RBP18.2■□□□□ 0.5
TUBB3-214ENST00000557490 SMCO2A6NFE2 343 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 STK3Q13188 491 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 NTRK3Q16288 839 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 GNPTABQ3T906 1256 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 CXCL17Q6UXB2 119 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 TRIM22Q8IYM9 498 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 CCDC12Q8WUD4 166 aaPredicted RBP18.2■□□□□ 0.5
TUBB3-214ENST00000557490 POLR3EQ9NVU0 708 aa18.2■□□□□ 0.5
TUBB3-214ENST00000557490 DDX41Q9UJV9 622 aaKnown RBP18.2■□□□□ 0.5
TUBB3-214ENST00000557490 KPNA6O60684 536 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 MYL3P08590 195 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 TLE2Q04725 743 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 SSRP1Q08945 709 aaKnown RBP18.19■□□□□ 0.5
TUBB3-214ENST00000557490 PCNX4Q63HM2 1172 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 TYW1BQ6NUM6 668 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-214ENST00000557490 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-214ENST00000557490 PCDHA6Q9UN73 950 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 PCDHA8Q9Y5H6 950 aa18.19■□□□□ 0.5
TUBB3-214ENST00000557490 A6NJR5 290 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 PQBP1O60828 265 aaKnown RBP18.18■□□□□ 0.5
TUBB3-214ENST00000557490 PPFIA3O75145 1194 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 RGS20O76081 388 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 FOSP01100 380 aaPredicted RBP18.18■□□□□ 0.5
TUBB3-214ENST00000557490 TGFB3P10600 412 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 NEK4P51957 841 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 AK2P54819 239 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 MRPS9P82933 396 aaKnown RBP18.18■□□□□ 0.5
TUBB3-214ENST00000557490 ARHGAP1Q07960 439 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 LAMC2Q13753 1193 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 PKN1Q16512 942 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 C6orf50Q9HD87 102 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 RTEL1Q9NZ71 1219 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 TPCN1Q9ULQ1 816 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 MROH7Q68CQ1 1323 aa18.18■□□□□ 0.5
TUBB3-214ENST00000557490 DCDC2CA8MYV0 355 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 ARVCFO00192 962 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 CDKL5O76039 1030 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 SHHQ15465 462 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 NLRX1Q86UT6 975 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 DHX37Q8IY37 1157 aaKnown RBP18.17■□□□□ 0.5
TUBB3-214ENST00000557490 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 AFG1LQ8WV93 481 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 TOX2Q96NM4 488 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 MTG1Q9BT17 334 aaPredicted RBP18.17■□□□□ 0.5
TUBB3-214ENST00000557490 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
TUBB3-214ENST00000557490 PRDM5Q9NQX1 630 aaPredicted RBP18.17■□□□□ 0.5
TUBB3-214ENST00000557490 ESYT2A0FGR8 921 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 FIBPO43427 364 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 PFKFB2O60825 505 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 GNA11P29992 359 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 ICAM3P32942 547 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 PURAQ00577 322 aaKnown RBP18.16■□□□□ 0.5
TUBB3-214ENST00000557490 AP3B2Q13367 1082 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 ITGA7Q13683 1181 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 ANKRD33Q7Z3H0 272 aa18.16■□□□□ 0.5
TUBB3-214ENST00000557490 EMID1Q96A84 441 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-214ENST00000557490 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-214ENST00000557490 DEXIO95424 95 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 GGPS1O95749 300 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 CLTBP09497 229 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 UBA1P22314 1058 aaKnown RBP18.15■□□□□ 0.5
TUBB3-214ENST00000557490 CDK7P50613 346 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 SMAD3P84022 425 aaKnown RBP18.15■□□□□ 0.5
TUBB3-214ENST00000557490 SCRN1Q12765 414 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 CELF3Q5SZQ8 465 aaKnown RBP18.15■□□□□ 0.5
TUBB3-214ENST00000557490 MCTP2Q6DN12 878 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 BICD2Q8TD16 824 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 ANO3Q9BYT9 981 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 C22orf23Q9BZE7 217 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 MLXIPQ9HAP2 919 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
TUBB3-214ENST00000557490 SH3GLB2Q9NR46 395 aa18.15■□□□□ 0.5
TUBB3-214ENST00000557490 SPATA31C2B4DYI2 1134 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 TLR3O15455 904 aaKnown RBP18.14■□□□□ 0.49
TUBB3-214ENST00000557490 MMP3P08254 477 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 PSMC6P62333 389 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 NEDD9Q14511 834 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 DGKDQ16760 1214 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 JAKMIP3Q5VZ66 844 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 PPTC7Q8NI37 304 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 GPRASP2Q96D09 838 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 CDHR1Q96JP9 859 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 PGBD1Q96JS3 809 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 SPATA33Q96N06 139 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 PDLIM7Q9NR12 457 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 TMEM39AQ9NV64 488 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 TMEM260Q9NX78 707 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 VPS54Q9P1Q0 977 aa18.14■□□□□ 0.49
TUBB3-214ENST00000557490 SORBS3O60504 671 aa18.13■□□□□ 0.49
TUBB3-214ENST00000557490 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
TUBB3-214ENST00000557490 NLRP5P59047 1200 aa18.13■□□□□ 0.49
TUBB3-214ENST00000557490 SP2Q02086 613 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms