RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 DBF4BQ8NFT6 615 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 DNERQ8NFT8 737 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 CLEC4DQ8WXI8 215 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 KAT2BQ92831 832 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 PBXIP1Q96AQ6 731 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 KATNAL1Q9BW62 490 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 IL17RBQ9NRM6 502 aa9.48□□□□□ -0.89
PCNX1-215ENST00000557428 CFAP54Q96N23 3096 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 TMEM221A6NGB7 291 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 C19orf67A6NJJ6 358 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 H3BNC9 293 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 M0R296 226 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 STXBP3O00186 592 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 MBTPS2O43462 519 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 GFRA3O60609 400 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 CTSHP09668 335 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 EDNRBP24530 442 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 MBTPS1Q14703 1052 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 FBXO11Q86XK2 927 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 FSD1Q9BTV5 496 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 IFIH1Q9BYX4 1025 aaKnown RBP9.47□□□□□ -0.89
PCNX1-215ENST00000557428 EMSYQ7Z589 1322 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 MYO7AQ13402 2215 aa9.47□□□□□ -0.89
PCNX1-215ENST00000557428 TECTAO75443 2155 aa9.46□□□□□ -0.89
PCNX1-215ENST00000557428 RSPH10B2B2RC85 870 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 RSPH10BP0C881 870 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 NDUFV1P49821 464 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 HTRA4P83105 476 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 DLX2Q07687 328 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 RBL2Q08999 1139 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 SMAD2Q15796 467 aaKnown RBP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 TRIM71Q2Q1W2 868 aaKnown RBP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 HERC4Q5GLZ8 1057 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 SP7Q8TDD2 431 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 SEPT8Q92599 483 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 FAM212AQ96EL1 285 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 CD207Q9UJ71 328 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 DDX19BQ9UMR2 479 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.46□□□□□ -0.9
PCNX1-215ENST00000557428 MRVI1Q9Y6F6 885 aa9.46□□□□□ -0.9
PCNX1-215ENST00000557428 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 LINC01565O15544 149 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 TBX10O75333 385 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 TOP1P11387 765 aaKnown RBP9.45□□□□□ -0.9
PCNX1-215ENST00000557428 MS4A1P11836 297 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
PCNX1-215ENST00000557428 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCNX1-215ENST00000557428 HYAL1Q12794 435 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
PCNX1-215ENST00000557428 STXBP2Q15833 593 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 ARHGEF16Q5VV41 709 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 BTNL9Q6UXG8 535 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 FIBCD1Q8N539 461 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 EDAQ92838 391 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 ATOH1Q92858 354 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-215ENST00000557428 TAAR1Q96RJ0 339 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 TMEM47Q9BQJ4 181 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 CPVLQ9H3G5 476 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 PNMA2Q9UL42 364 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 DOCK5Q9H7D0 1870 aa9.45□□□□□ -0.9
PCNX1-215ENST00000557428 C17orf102A2RUQ5 167 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 GRM6O15303 877 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 NCK2O43639 380 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 DHX16O60231 1041 aaKnown RBP9.44□□□□□ -0.9
PCNX1-215ENST00000557428 KDM4AO75164 1064 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 F2P00734 622 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 PDHBP11177 359 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 LTBRP36941 435 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 TCF15Q12870 199 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 HIC1Q14526 733 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 PLEKHG4Q58EX7 1191 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 TRIM67Q6ZTA4 783 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 NSUN6Q8TEA1 469 aaKnown RBP9.44□□□□□ -0.9
PCNX1-215ENST00000557428 TBC1D5Q92609 795 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 ATP6V0A1Q93050 837 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 YTHDC1Q96MU7 727 aaKnown RBP9.44□□□□□ -0.9
PCNX1-215ENST00000557428 SPATA33Q96N06 139 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 RMDN3Q96TC7 470 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 PRRX2Q99811 253 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 C11orf84Q9BUA3 381 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-215ENST00000557428 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
PCNX1-215ENST00000557428 COL4A6Q14031 1691 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 CCDC171Q6TFL3 1326 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 MYCLP12524 364 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-215ENST00000557428 VCPP55072 806 aaKnown RBP9.43□□□□□ -0.9
PCNX1-215ENST00000557428 ZNF543Q08ER8 600 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 LAMC2Q13753 1193 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 CDC37Q16543 378 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-215ENST00000557428 FBXL6Q8N531 539 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 PPTC7Q8NI37 304 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 SYTL5Q8TDW5 730 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-215ENST00000557428 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-215ENST00000557428 TOP1MTQ969P6 601 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 UBA5Q9GZZ9 404 aa9.43□□□□□ -0.9
PCNX1-215ENST00000557428 COL20A1Q9P218 1284 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms