RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 FAM110CQ1W6H9 321 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 CDC42EP5Q6NZY7 148 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 TMC7Q7Z402 723 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 GALNT12Q8IXK2 581 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 SCYL3Q8IZE3 742 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 AGGF1Q8N302 714 aaeCLIP6.04□□□□□ -1.44
ATXN3-247ENST00000557311 ANKRD13CQ8N6S4 541 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 KLHL23Q8NBE8 558 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 GALNT11Q8NCW6 608 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 IPO4Q8TEX9 1081 aaKnown RBP6.04□□□□□ -1.44
ATXN3-247ENST00000557311 FAM129BQ96TA1 746 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 USP26Q9BXU7 913 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
ATXN3-247ENST00000557311 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 ZFP64Q9NPA5 681 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 USP40Q9NVE5 1235 aa6.04□□□□□ -1.44
ATXN3-247ENST00000557311 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
ATXN3-247ENST00000557311 A0A1W2PP55 124 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 DDX3YO15523 660 aaKnown RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 PDE8BO95263 885 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 COL6A1P12109 1028 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 NCLP19338 710 aaKnown RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 GSTM4Q03013 218 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 C19orf57Q0VDD7 668 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 NFIAQ12857 509 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 METTL24Q5JXM2 366 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 ADAMTSL4Q6UY14 1074 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 ZFPM1Q8IX07 1006 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 CCDC74AQ96AQ1 378 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 KLHDC7BQ96G42 594 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 FAM161BQ96MY7 647 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 RBCK1Q9BYM8 510 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 PPP4R2Q9NY27 417 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 AGTPBP1Q9UPW5 1226 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 DAGLAQ9Y4D2 1042 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-247ENST00000557311 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
ATXN3-247ENST00000557311 COL6A3P12111 3177 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 TRIM75PA6NK02 468 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 F6X3S4 739 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 SART1O43290 800 aaKnown RBP6.02□□□□□ -1.45
ATXN3-247ENST00000557311 ENTPD3O75355 529 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 VAMP4O75379 141 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 ALDH1L1O75891 902 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
ATXN3-247ENST00000557311 XRCC5P13010 732 aaKnown RBP6.02□□□□□ -1.45
ATXN3-247ENST00000557311 NOS3P29474 1203 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 CCDC27Q2M243 656 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 PEAR1Q5VY43 1037 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-247ENST00000557311 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-247ENST00000557311 IDI2Q9BXS1 227 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 DNAJC25Q9H1X3 360 aa6.02□□□□□ -1.45
ATXN3-247ENST00000557311 PFASO15067 1338 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 KIF16BQ96L93 1317 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 A0A096LPE4 126 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 PNMA6FA0A0J9YX94 578 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 LDHBP07195 334 aaKnown RBP6.01□□□□□ -1.45
ATXN3-247ENST00000557311 H2AFB1P0C5Y9 115 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 H2AFB2P0C5Z0 115 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 FGFR2P21802 821 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 RGS3P49796 1198 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 LRRC26Q2I0M4 334 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 SPRED3Q2MJR0 410 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 LRRC24Q50LG9 513 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 DIEXFQ68CQ4 756 aaKnown RBP6.01□□□□□ -1.45
ATXN3-247ENST00000557311 TEX2Q8IWB9 1127 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 UBASH3BQ8TF42 649 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 KAZALD1Q96I82 304 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 SSBP4Q9BWG4 385 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-247ENST00000557311 SRCIN1Q9C0H9 1055 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 GNL3LQ9NVN8 582 aaKnown RBP6.01□□□□□ -1.45
ATXN3-247ENST00000557311 KCNK4Q9NYG8 393 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 SOX13Q9UN79 622 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 LAMB1P07942 1786 aa6.01□□□□□ -1.45
ATXN3-247ENST00000557311 IL16Q14005 1332 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 F8W735 103 aaPredicted RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 WISP1O95388 367 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 ATP2B2Q01814 1243 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 PCDH1Q08174 1060 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 CACNB2Q08289 660 aaPredicted RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 SPP2Q13103 211 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 RABL6Q3YEC7 729 aaPredicted RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 GPRC5AQ8NFJ5 357 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms