RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 IER5LQ5T953 404 aa14.74□□□□□ -0.05
PSEN1-221ENST00000557293 SERINC5Q86VE9 423 aa14.74□□□□□ -0.05
PSEN1-221ENST00000557293 NSUN6Q8TEA1 469 aaKnown RBP14.74□□□□□ -0.05
PSEN1-221ENST00000557293 GPATCH3Q96I76 525 aa14.74□□□□□ -0.05
PSEN1-221ENST00000557293 IWS1Q96ST2 819 aa14.74□□□□□ -0.05
PSEN1-221ENST00000557293 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
PSEN1-221ENST00000557293 MAF1Q9H063 256 aa14.74□□□□□ -0.05
PSEN1-221ENST00000557293 NSUN3Q9H649 340 aaKnown RBP14.74□□□□□ -0.05
PSEN1-221ENST00000557293 ALG13Q9NP73 1137 aaKnown RBP14.74□□□□□ -0.05
PSEN1-221ENST00000557293 KIAA1217Q5T5P2 1943 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 RSPH10B2B2RC85 870 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 MBTPS2O43462 519 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 FGAP02671 866 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 RSPH10BP0C881 870 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 HOXC8P31273 242 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 LAMC2Q13753 1193 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 BMP8AQ7Z5Y6 402 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 RPAINQ86UA6 219 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 FBXO11Q86XK2 927 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 PPTC7Q8NI37 304 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 MFSD14AQ96MC6 490 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 TTC14Q96N46 770 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 FSD1Q9BTV5 496 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 CHMP4BQ9H444 224 aaKnown RBP14.73□□□□□ -0.05
PSEN1-221ENST00000557293 CLDND1Q9NY35 253 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 MUTYHQ9UIF7 546 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 WDFY4Q6ZS81 3184 aa14.73□□□□□ -0.05
PSEN1-221ENST00000557293 TTC41PQ6P2S7 1318 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 PPFIA4O75335 1185 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 NR3C2P08235 984 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 GOLGA8HP0CJ92 632 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 HYAL1Q12794 435 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 MYSM1Q5VVJ2 828 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 EP400NLQ6ZTU2 488 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 RNF135Q8IUD6 432 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 RMDN3Q96TC7 470 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 C16orf70Q9BSU1 422 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 KATNAL1Q9BW62 490 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 UPF3BQ9BZI7 483 aaKnown RBP14.72□□□□□ -0.05
PSEN1-221ENST00000557293 FAM50BQ9Y247 325 aa14.72□□□□□ -0.05
PSEN1-221ENST00000557293 EMSYQ7Z589 1322 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 MYH7BA7E2Y1 1941 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 GRM6O15303 877 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.05
PSEN1-221ENST00000557293 UPP2O95045 317 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 GTF2F1P35269 517 aaKnown RBP eCLIP14.71□□□□□ -0.05
PSEN1-221ENST00000557293 THPOP40225 353 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 SP2Q02086 613 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 HSDL1Q3SXM5 330 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 RRP12Q5JTH9 1297 aaKnown RBP14.71□□□□□ -0.05
PSEN1-221ENST00000557293 DHX37Q8IY37 1157 aaKnown RBP14.71□□□□□ -0.05
PSEN1-221ENST00000557293 EDAQ92838 391 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 BCAS3Q9H6U6 928 aa14.71□□□□□ -0.05
PSEN1-221ENST00000557293 ATG2AQ2TAZ0 1938 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 C5orf67F2Z3F1 127 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 OPLAHO14841 1288 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 EIF2AK2P19525 551 aaKnown RBP14.7□□□□□ -0.06
PSEN1-221ENST00000557293 CAMK1Q14012 370 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 CLUL1Q15846 466 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 CELF3Q5SZQ8 465 aaKnown RBP14.7□□□□□ -0.06
PSEN1-221ENST00000557293 YME1L1Q96TA2 773 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 RNPEPQ9H4A4 650 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 PXMP2Q9NR77 195 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 TOMM22Q9NS69 142 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 COL4A6Q14031 1691 aa14.7□□□□□ -0.06
PSEN1-221ENST00000557293 TRIOO75962 3097 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 ABCB11O95342 1321 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 SALL3Q9BXA9 1300 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 LINC01565O15544 149 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 TREHO43280 583 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 NCK2O43639 380 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 SORBS3O60504 671 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 TBX10O75333 385 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 BMPR1AP36894 532 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 TCF15Q12870 199 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 ADAM15Q13444 863 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 CDC37Q16543 378 aaPredicted RBP14.69□□□□□ -0.06
PSEN1-221ENST00000557293 GPATCH4Q5T3I0 446 aaKnown RBP14.69□□□□□ -0.06
PSEN1-221ENST00000557293 ADGRF4Q8IZF3 695 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 SEPT8Q92599 483 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 MRVI1Q9Y6F6 885 aa14.69□□□□□ -0.06
PSEN1-221ENST00000557293 NLRC5Q86WI3 1866 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 RB1P06400 928 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 GHRHRQ02643 423 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 QRICH1Q2TAL8 776 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 ARHGEF16Q5VV41 709 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 TRIM67Q6ZTA4 783 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 MCF2L2Q86YR7 1114 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 GPKOWQ92917 476 aaPredicted RBP eCLIP14.68□□□□□ -0.06
PSEN1-221ENST00000557293 ATP6V0A1Q93050 837 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 MSLNLQ96KJ4 702 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 LMAN2LQ9H0V9 348 aa14.68□□□□□ -0.06
PSEN1-221ENST00000557293 RC3H2Q9HBD1 1191 aaKnown RBP14.68□□□□□ -0.06
PSEN1-221ENST00000557293 C17orf102A2RUQ5 167 aa14.67□□□□□ -0.06
PSEN1-221ENST00000557293 ST18O60284 1047 aa14.67□□□□□ -0.06
PSEN1-221ENST00000557293 GGPS1O95749 300 aa14.67□□□□□ -0.06
PSEN1-221ENST00000557293 SMIM10L2AP0DMW4 78 aa14.67□□□□□ -0.06
PSEN1-221ENST00000557293 SMIM10L2BP0DMW5 78 aa14.67□□□□□ -0.06
PSEN1-221ENST00000557293 HSPD1P10809 573 aaKnown RBP14.67□□□□□ -0.06
PSEN1-221ENST00000557293 HSD17B4P51659 736 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms