RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 C1QTNF2Q9BXJ5 285 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 PBX4Q9BYU1 374 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 VTA1Q9NP79 307 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 PRDM6Q9NQX0 595 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 HOMER2Q9NSB8 354 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 CYP39A1Q9NYL5 469 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 MSRAQ9UJ68 235 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 TSPY2A6NKD2 308 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 ORC4O43929 436 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 ICAM1P05362 532 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 ALAS1P13196 640 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 RFC5P40937 340 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 IKQ13123 557 aaPredicted RBP10.23□□□□□ -0.77
VRK1-206ENST00000557222 ITGA7Q13683 1181 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 NR6A1Q15406 480 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 ALX1Q15699 326 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 TAPT1Q6NXT6 567 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 BTNL9Q6UXG8 535 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 NOL8Q76FK4 1167 aaKnown RBP10.23□□□□□ -0.77
VRK1-206ENST00000557222 TLK2Q86UE8 772 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 DCAF4Q8WV16 495 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 PCMTD1Q96MG8 357 aaPredicted RBP10.23□□□□□ -0.77
VRK1-206ENST00000557222 FSD1Q9BTV5 496 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 MAF1Q9H063 256 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 HIPK3Q9H422 1215 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 ADD3Q9UEY8 706 aaKnown RBP10.23□□□□□ -0.77
VRK1-206ENST00000557222 PRR12Q9ULL5 1215 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 STX8Q9UNK0 236 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 ASTN1O14525 1302 aa10.23□□□□□ -0.77
VRK1-206ENST00000557222 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
VRK1-206ENST00000557222 RBM47A0AV96 593 aaKnown RBP10.22□□□□□ -0.77
VRK1-206ENST00000557222 DYNC1LI2O43237 492 aaPredicted RBP10.22□□□□□ -0.77
VRK1-206ENST00000557222 PFKMP08237 780 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 SUPT20HL2P0C7V6 817 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 CYP2C18P33260 490 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 BEX3Q00994 111 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 DUSP28Q4G0W2 176 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 TSHZ3Q63HK5 1081 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 CXCL17Q6UXB2 119 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 SEC62Q99442 399 aaKnown RBP10.22□□□□□ -0.77
VRK1-206ENST00000557222 NOC4LQ9BVI4 516 aaKnown RBP10.22□□□□□ -0.77
VRK1-206ENST00000557222 PPP1R12CQ9BZL4 782 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 RANBP17Q9H2T7 1088 aaKnown RBP10.22□□□□□ -0.77
VRK1-206ENST00000557222 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 TCP11L1Q9NUJ3 509 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 FKBPLQ9UIM3 349 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 GRIN2DO15399 1336 aa10.22□□□□□ -0.77
VRK1-206ENST00000557222 NKRFO15226 690 aaKnown RBP eCLIP10.21□□□□□ -0.77
VRK1-206ENST00000557222 KPNA6O60684 536 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 ACRP10323 421 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 PCP11498 1178 aaKnown RBP10.21□□□□□ -0.77
VRK1-206ENST00000557222 BMP1P13497 986 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 SNRPBP14678 240 aaKnown RBP10.21□□□□□ -0.77
VRK1-206ENST00000557222 MX1P20591 662 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 GRM5P41594 1212 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 NT5C2P49902 561 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 KCTD1Q719H9 257 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 USP38Q8NB14 1042 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 EVI5LQ96CN4 794 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 MPHOSPH6Q99547 160 aaKnown RBP10.21□□□□□ -0.77
VRK1-206ENST00000557222 HELLSQ9NRZ9 838 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 CCPG1Q9ULG6 757 aa10.21□□□□□ -0.77
VRK1-206ENST00000557222 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.77
VRK1-206ENST00000557222 GRXCR1A8MXD5 290 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 B4DLN1 442 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 FOXP2O15409 715 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 B4GALT4O60513 344 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 RANBP6O60518 1105 aaKnown RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 ZMYM6O95789 1325 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 CPT1AP50416 773 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 MRPL12P52815 198 aaKnown RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 NR5A1Q13285 461 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 BRDTQ58F21 947 aaPredicted RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 MUM1L1Q5H9M0 696 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 PDXDC2PQ6P474 469 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 KIAA1211Q6ZU35 1233 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 TRIM46Q7Z4K8 759 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 TTC14Q96N46 770 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 ALDH8A1Q9H2A2 487 aaPredicted RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 SLC28A3Q9HAS3 691 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 PDGFCQ9NRA1 345 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 CXXC1Q9P0U4 656 aaPredicted RBP10.2□□□□□ -0.78
VRK1-206ENST00000557222 THEGQ9P2T0 379 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 PCDHA11Q9Y5I1 949 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
VRK1-206ENST00000557222 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 SALL3Q9BXA9 1300 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 TIMP2P16035 220 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 POU3F3P20264 500 aaPredicted RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 RFC2P35250 354 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 ALDH5A1P51649 535 aaPredicted RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 MRPS5P82675 430 aaKnown RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 PTPN11Q06124 597 aaPredicted RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 SYDE2Q5VT97 1194 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 NSMFQ6X4W1 530 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms