RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ARHGAP4P98171 946 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 COASYQ13057 564 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 UNC13DQ70J99 1090 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 NUP58Q9BVL2 599 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 CUEDC2Q9H467 287 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 ABCB6Q9NP58 842 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 ZBED6P86452 979 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 GFPT1Q06210 699 aaPredicted RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 KCNB1Q14721 858 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 TAF3Q5VWG9 929 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 APOBEC3HQ6NTF7 200 aaKnown RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 CC2D1AQ6P1N0 951 aaPredicted RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 IFT81Q8WYA0 676 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 BMP3P12645 472 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 ECE1P42892 770 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 SLC7A5Q01650 507 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 C2orf54Q08AI8 447 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 CT47A1Q5JQC4 288 aaPredicted RBP16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 CCDC17Q96LX7 622 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 EMILIN3Q9NT22 766 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 ADAMTS1Q9UHI8 967 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 NCK2O43639 380 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 PRPHP41219 470 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 PRKG1Q13976 671 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 CCDC93Q567U6 631 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 FAM133AQ8N9E0 248 aa16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 MMTAG2Q9BU76 263 aaKnown RBP16.96■□□□□ 0.31
TMEM55B-207ENST00000557041 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
TMEM55B-207ENST00000557041 NDUFB10O96000 172 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 CYP2J2P51589 502 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 FKBP3Q00688 224 aaKnown RBP16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 KLHL30Q0D2K2 578 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 PRMT6Q96LA8 375 aaPredicted RBP16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 ZNF277Q9NRM2 450 aaPredicted RBP16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 MAN2A1Q16706 1144 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 GTPBP4Q9BZE4 634 aaKnown RBP16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 RIOX1Q9H6W3 641 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 STK17AQ9UEE5 414 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 KIF11P52732 1056 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 DMTNQ08495 405 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 PODNQ7Z5L7 613 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 EHBP1Q8NDI1 1231 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 NT5C3AQ9H0P0 336 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 RIC8AQ9NPQ8 531 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 EHD2Q9NZN4 543 aa16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
TMEM55B-207ENST00000557041 KIF20AO95235 890 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 FTCDO95954 541 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 VSNL1P62760 191 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 LUC7LQ9NQ29 371 aaKnown RBP16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 PACSIN2Q9UNF0 486 aaPredicted RBP16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 MORC2Q9Y6X9 1032 aaPredicted RBP16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 EPHB6O15197 1021 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 ECM1Q16610 540 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 ANKS1AQ92625 1134 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 CAPN11Q9UMQ6 739 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 PSMC6P62333 389 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 SLC9C1Q4G0N8 1177 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 TAF4BQ92750 862 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 COL4A3BPQ9Y5P4 624 aa16.94■□□□□ 0.3
TMEM55B-207ENST00000557041 NID2Q14112 1375 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 SFMBT2Q5VUG0 894 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 SFR1Q86XK3 245 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 DAGLBQ8NCG7 672 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 PNKPQ96T60 521 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 MMS19Q96T76 1030 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 FBXO28Q9NVF7 368 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 EN1Q05925 392 aaPredicted RBP16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 KIAA0753Q2KHM9 967 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 GBP3Q9H0R5 595 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 GAS7O60861 476 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 MYL1P05976 194 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 ACTN1P12814 892 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 H2AFXP16104 143 aaPredicted RBP16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 ARHGAP44Q17R89 818 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 UTP14CQ5TAP6 766 aaKnown RBP16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 HDXQ7Z353 690 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 ARMCX3Q9UH62 379 aaPredicted RBP16.93■□□□□ 0.3
TMEM55B-207ENST00000557041 RSPH10B2B2RC85 870 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 RSPH10BP0C881 870 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 TERF2Q15554 542 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 CC2D2BQ6DHV5 1058 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms