RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, human

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-222	ENST00000556700	GRXCR2	A6NFK2	248 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700		E7EWF7	191 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	MMP3	P08254	477 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	SNHG28	P0DPA3	235 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	PDHB	P11177	359 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	HIC1	Q14526	733 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	LY6K	Q17RY6	165 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	GPATCH4	Q5T3I0	446 aa	Known RBP	13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	ZKSCAN3	Q9BRR0	538 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	ZBED2	Q9BTP6	218 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	ZSWIM5	Q9P217	1185 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	HDAC6	Q9UBN7	1215 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	GTF2IRD1	Q9UHL9	959 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	PNMA2	Q9UL42	364 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	MTUS1	Q9ULD2	1270 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	NOD1	Q9Y239	953 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	WDR19	Q8NEZ3	1342 aa		13.34	□□□□□ -0.27
NUMB-222	ENST00000556700	HAS3	O00219	553 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	IFIT3	O14879	490 aa	Known RBP	13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	PARN	O95453	639 aa	Known RBP	13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	KCNA5	P22460	613 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	CHMP4BP1	P59074	171 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	KRT32	Q14532	448 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	CREB3L3	Q68CJ9	461 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	PNMA1	Q8ND90	353 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	NEK9	Q8TD19	979 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	ANKS1A	Q92625	1134 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	TAAR1	Q96RJ0	339 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	C17orf80	Q9BSJ5	609 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	COL20A1	Q9P218	1284 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	MYO7A	Q13402	2215 aa		13.33	□□□□□ -0.28
NUMB-222	ENST00000556700	SI	P14410	1827 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	SLC27A2	O14975	620 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	HTRA4	P83105	476 aa	Predicted RBP	13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	ZNF200	P98182	395 aa	Predicted RBP	13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	ZNF543	Q08ER8	600 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	COL19A1	Q14993	1142 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	WTAP	Q15007	396 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	ASPRV1	Q53RT3	343 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	CCDC155	Q8N6L0	562 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	ENAH	Q8N8S7	591 aa	Predicted RBP	13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	SP7	Q8TDD2	431 aa	Predicted RBP	13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	MTA3	Q9BTC8	594 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	DDX41	Q9UJV9	622 aa	Known RBP	13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	USP34	Q70CQ2	3546 aa		13.32	□□□□□ -0.28
NUMB-222	ENST00000556700	EPB41L2	O43491	1005 aa	Known RBP	13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	GH1	P01241	217 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	CAST	P20810	708 aa	Known RBP	13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	MCM5	P33992	734 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	IKBKE	Q14164	716 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	NECTIN1	Q15223	517 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	ZNF618	Q5T7W0	954 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	SEPT14	Q6ZU15	432 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	EMID1	Q96A84	441 aa	Predicted RBP	13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	CPVL	Q9H3G5	476 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	INSL6	Q9Y581	213 aa		13.31	□□□□□ -0.28
NUMB-222	ENST00000556700	C19orf67	A6NJJ6	358 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	EFCAB14	O75071	495 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	PARP1	P09874	1014 aa	Known RBP	13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	ALAD	P13716	330 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	PSEN2	P49810	448 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	MRE11	P49959	708 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	NHLH1	Q02575	133 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	PTK7	Q13308	1070 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	FAM117B	Q6P1L5	589 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	CYB5R4	Q7L1T6	521 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	MRPL38	Q96DV4	380 aa	Known RBP	13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	TMEM87B	Q96K49	555 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	MPHOSPH6	Q99547	160 aa	Known RBP	13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	OSBPL7	Q9BZF2	842 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	UBA5	Q9GZZ9	404 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	MAF1	Q9H063	256 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	KIAA1217	Q5T5P2	1943 aa		13.3	□□□□□ -0.28
NUMB-222	ENST00000556700	ZNF318	Q5VUA4	2279 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700		B4DLN1	442 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700		H3BQ06	376 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	DHX16	O60231	1041 aa	Known RBP	13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	LGR5	O75473	907 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	F2	P00734	622 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	HMGB1	P09429	215 aa	Known RBP	13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	HOXD8	P13378	290 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	MRPL12	P52815	198 aa	Known RBP	13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	SEC23A	Q15436	765 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	EPC2	Q52LR7	807 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	STOX1	Q6ZVD7	989 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	CHST3	Q7LGC8	479 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	CATIP	Q7Z7H3	387 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	TMTC2	Q8N394	836 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	FBXO22	Q8NEZ5	403 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	DBF4B	Q8NFT6	615 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	FBXL18	Q96ME1	805 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	IWS1	Q96ST2	819 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	MYH7B	A7E2Y1	1941 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	MICAL3	Q7RTP6	2002 aa		13.29	□□□□□ -0.28
NUMB-222	ENST00000556700	CCDC69	A6NI79	296 aa		13.28	□□□□□ -0.28
NUMB-222	ENST00000556700	PRC1	O43663	620 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms