RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-206ENST00000556375 PHKBQ93100 1093 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-206ENST00000556375 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
SLIRP-206ENST00000556375 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-206ENST00000556375 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 TANC1Q9C0D5 1861 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 SMCO2A6NFE2 343 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 SPATA31C2B4DYI2 1134 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-206ENST00000556375 CD4P01730 458 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-206ENST00000556375 RAG1P15918 1043 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
SLIRP-206ENST00000556375 SP2Q02086 613 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 SEMA3FQ13275 785 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 DGKDQ16760 1214 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 C8orf34Q49A92 452 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
SLIRP-206ENST00000556375 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 TRIM22Q8IYM9 498 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 GPRASP2Q96D09 838 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
SLIRP-206ENST00000556375 CPLX1O14810 134 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 ITGB8P26012 769 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 NEDD9Q14511 834 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 NFRKBQ6P4R8 1299 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 CPLX2Q6PUV4 134 aaKnown RBP13.2□□□□□ -0.3
SLIRP-206ENST00000556375 TDHQ8IZJ6 230 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 BADQ92934 168 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
SLIRP-206ENST00000556375 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
SLIRP-206ENST00000556375 B4GALT4O60513 344 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 F2P00734 622 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 TIMP1P01033 207 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 ITGB5P18084 799 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 GNA11P29992 359 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 SREBF1P36956 1147 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLIRP-206ENST00000556375 AK2P54819 239 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-206ENST00000556375 STK3Q13188 491 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 NBPF20Q3BBV1 942 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 HSDL1Q3SXM5 330 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 METTL7BQ6UX53 244 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
SLIRP-206ENST00000556375 KAT2BQ92831 832 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 KATNAL1Q9BW62 490 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 MLXIPQ9HAP2 919 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 C6orf50Q9HD87 102 aa13.19□□□□□ -0.3
SLIRP-206ENST00000556375 SORBS3O60504 671 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 PFKFB2O60825 505 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 CDKL5O76039 1030 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 DEXIO95424 95 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 FPGSQ05932 587 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
SLIRP-206ENST00000556375 SCRN1Q12765 414 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 MTMR1Q13613 665 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 FAM177A1Q8N128 213 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-206ENST00000556375 GIMAP8Q8ND71 665 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-206ENST00000556375 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-206ENST00000556375 HIPK3Q9H422 1215 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 VPS54Q9P1Q0 977 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
SLIRP-206ENST00000556375 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 HAS3O00219 553 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
SLIRP-206ENST00000556375 MAFGO15525 162 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 KCNA2P16389 499 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 PSEN2P49810 448 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
SLIRP-206ENST00000556375 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
SLIRP-206ENST00000556375 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms