RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 RFX1P22670 979 aa16.78■□□□□ 0.28
LRP1-211ENST00000556356 NR2F2P24468 414 aa16.78■□□□□ 0.28
LRP1-211ENST00000556356 PPP4CP60510 307 aa16.78■□□□□ 0.28
LRP1-211ENST00000556356 ALCAMQ13740 583 aa16.78■□□□□ 0.28
LRP1-211ENST00000556356 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
LRP1-211ENST00000556356 NDUFB10O96000 172 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
LRP1-211ENST00000556356 TKFCQ3LXA3 575 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
LRP1-211ENST00000556356 GINM1Q9NU53 330 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 CDC27P30260 824 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 RNASELQ05823 741 aaKnown RBP16.77■□□□□ 0.28
LRP1-211ENST00000556356 CACTINQ8WUQ7 758 aaKnown RBP16.77■□□□□ 0.28
LRP1-211ENST00000556356 MIS12Q9H081 205 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 VCPKMTQ9H867 229 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
LRP1-211ENST00000556356 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 CETPP11597 493 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 PPM1KQ8N3J5 372 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 ZFP91Q96JP5 570 aaPredicted RBP16.77■□□□□ 0.27
LRP1-211ENST00000556356 ZNF543Q08ER8 600 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 CCDC51Q96ER9 411 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 PRIMPOLQ96LW4 560 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 SPZ1Q9BXG8 430 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.27
LRP1-211ENST00000556356 USTQ9Y2C2 406 aa16.77■□□□□ 0.27
LRP1-211ENST00000556356 GAS8O95995 478 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 SFNP31947 248 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 EP400NLQ6ZTU2 488 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 PSMD2Q13200 908 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
LRP1-211ENST00000556356 BHMT2Q9H2M3 363 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 TUBB4BP68371 445 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 GPIHBP1Q8IV16 184 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 RAET1EQ8TD07 263 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 NEK9Q8TD19 979 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 SECISBP2LQ93073 1101 aaKnown RBP16.76■□□□□ 0.27
LRP1-211ENST00000556356 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
LRP1-211ENST00000556356 MYL7Q01449 175 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 RASSF7Q02833 373 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 LRRC41Q15345 812 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 P2RX5Q93086 422 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 PSMD1Q99460 953 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 STIM2Q9P246 746 aa16.76■□□□□ 0.27
LRP1-211ENST00000556356 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 HSF2BPO75031 334 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 EPHX2P34913 555 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 LACTBP83111 547 aaPredicted RBP16.75■□□□□ 0.27
LRP1-211ENST00000556356 MAP2K1Q02750 393 aaPredicted RBP16.75■□□□□ 0.27
LRP1-211ENST00000556356 CCL15Q16663 113 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 FAM186BQ8IYM0 893 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 TMEM260Q9NX78 707 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 RASA1P20936 1047 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
LRP1-211ENST00000556356 PDE6CP51160 858 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 CALCOCO2Q13137 446 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 ZNF658Q5TYW1 1059 aaPredicted RBP16.75■□□□□ 0.27
LRP1-211ENST00000556356 TYW1BQ6NUM6 668 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 ARHGEF37A1IGU5 675 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 STK10O94804 968 aaKnown RBP16.75■□□□□ 0.27
LRP1-211ENST00000556356 MB21D1Q8N884 522 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 MYO1AQ9UBC5 1043 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 CCDC14Q49A88 953 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 KCNV1Q6PIU1 500 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 METTL23Q86XA0 190 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 SYCE1Q8N0S2 351 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 CNOT6LQ96LI5 555 aaKnown RBP16.75■□□□□ 0.27
LRP1-211ENST00000556356 PPP1R16BQ96T49 567 aa16.75■□□□□ 0.27
LRP1-211ENST00000556356 K7ERI5 159 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 OR8K1Q8NGG5 319 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 U2AF1L4Q8WU68 220 aaKnown RBP16.74■□□□□ 0.27
LRP1-211ENST00000556356 MTRF1LQ9UGC7 380 aaKnown RBP16.74■□□□□ 0.27
LRP1-211ENST00000556356 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
LRP1-211ENST00000556356 MRPS9P82933 396 aaKnown RBP16.74■□□□□ 0.27
LRP1-211ENST00000556356 CXCL9Q07325 125 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 EXOC3L4Q17RC7 722 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 TTBK2Q6IQ55 1244 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 FAM204AQ9H8W3 233 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 ZNF302Q9NR11 478 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 FANCLQ9NW38 375 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 CATSPER4Q7RTX7 472 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 VPS33BQ9H267 617 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 MYO5BQ9ULV0 1848 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 PHLPP2Q6ZVD8 1323 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 FKBP3Q00688 224 aaKnown RBP16.74■□□□□ 0.27
LRP1-211ENST00000556356 SURF1Q15526 300 aa16.74■□□□□ 0.27
LRP1-211ENST00000556356 STOX1Q6ZVD7 989 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms