RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 NDOR1Q9UHB4 597 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 MYRFQ9Y2G1 1151 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 IRAK3Q9Y616 596 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 ESYT3A0FGR9 886 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 ABLIM1O14639 778 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 MAPKAPK2P49137 400 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 CDR1P51861 262 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 GTF2A2P52657 109 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 EFEMP1Q12805 493 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 LBX2Q6XYB7 198 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 IFNL3Q8IZI9 196 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 RNPC3Q96LT9 517 aaKnown RBP5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 COA3Q9Y2R0 106 aaPredicted RBP5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 PCDHA9Q9Y5H5 950 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 PCDHA8Q9Y5H6 950 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 MRPL42Q9Y6G3 142 aaKnown RBP5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 X6R8D5 127 aa5.4□□□□□ -1.54
SUPT16H-206ENST00000556309 H7BY64 318 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 SGSM2O43147 1006 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 COL6A2P12110 1019 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 AFF3P51826 1226 aaKnown RBP5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 GPR85P60893 370 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 TMEM62Q0P6H9 643 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 RSPO2Q6UXX9 243 aaPredicted RBP5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 MTDHQ86UE4 582 aaKnown RBP5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 JAZF1Q86VZ6 243 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 LDHDQ86WU2 507 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 Q8N1Y9 231 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 NETO2Q8NC67 525 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 SLC7A14Q8TBB6 771 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 PTPRN2Q92932 1015 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 IPPKQ9H8X2 491 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 SLC52A2Q9HAB3 445 aa5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 LUC7LQ9NQ29 371 aaKnown RBP5.39□□□□□ -1.55
SUPT16H-206ENST00000556309 PPP1R12AO14974 1030 aaPredicted RBP5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 RAPGEF3O95398 923 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 CRTAMO95727 393 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 SOD2P04179 222 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 SRGAP2CP0DJJ0 459 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 GRK2P25098 689 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 GRK3P35626 688 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 MC3RP41968 323 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 GABREP78334 506 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 GUCY1A3Q02108 690 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 ZC3H12BQ5HYM0 836 aaKnown RBP5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 MROH9Q5TGP6 573 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 MAMDC2Q7Z304 686 aaPredicted RBP5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 FRMD5Q7Z6J6 570 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 RBM12BQ8IXT5 1001 aaKnown RBP5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 ALG3Q92685 438 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 DACT3Q96B18 629 aaPredicted RBP5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 PEX11GQ96HA9 241 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 NUDT5Q9UKK9 219 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 PALD1Q9ULE6 856 aa5.38□□□□□ -1.55
SUPT16H-206ENST00000556309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 RASGRP1O95267 797 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 PMLP29590 882 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 KIZQ2M2Z5 673 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 MILR1Q7Z6M3 343 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 RIOX2Q8IUF8 465 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 IGDCC3Q8IVU1 814 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 MZB1Q8WU39 189 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 CLUHP3Q96NS8 147 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 ZFYVE21Q9BQ24 234 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 SYT3Q9BQG1 590 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 AP5M1Q9H0R1 490 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 EPB41L1Q9H4G0 881 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 NCOA5Q9HCD5 579 aaKnown RBP5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 PCDHA5Q9Y5H7 936 aa5.37□□□□□ -1.55
SUPT16H-206ENST00000556309 OTOL1A6NHN0 477 aaPredicted RBP5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 AQP7O14520 342 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 NKRFO15226 690 aaKnown RBP eCLIP5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 DGKIO75912 1065 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 ASMTLO95671 621 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 ASGR2P07307 311 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 ATF2P15336 505 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 LIMS1P48059 325 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 SSPNQ14714 243 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 STEAP3Q658P3 488 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 GIMAP6Q6P9H5 292 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 BRAPQ7Z569 592 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 FGD2Q7Z6J4 655 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 PCDH19Q8TAB3 1148 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 PANK1Q8TE04 598 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 SEC14L1Q92503 715 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 TSPAN17Q96FV3 270 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 SCLYQ96I15 445 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 ALG1Q9BT22 464 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 FANCLQ9NW38 375 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 SFMBT1Q9UHJ3 866 aa5.36□□□□□ -1.55
SUPT16H-206ENST00000556309 FAM47E-STBD1D6RA91 191 aa5.35□□□□□ -1.55
SUPT16H-206ENST00000556309 HGSO14964 777 aaPredicted RBP5.35□□□□□ -1.55
SUPT16H-206ENST00000556309 SLC27A2O14975 620 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms