RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CCT6AP40227 531 aaKnown RBP16.48■□□□□ 0.23
VPS33B-205ENST00000556096 PPP1R2P41236 205 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 PRCPP42785 496 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 IREB2P48200 963 aaKnown RBP16.48■□□□□ 0.23
VPS33B-205ENST00000556096 HUNKP57058 714 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 GSDMDP57764 484 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 PAK1Q13153 545 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 DGKZQ13574 1117 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 MCM6Q14566 821 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 COBLL1Q53SF7 1204 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 CDKAL1Q5VV42 579 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
VPS33B-205ENST00000556096 SAMSN1Q9NSI8 373 aaKnown RBP16.48■□□□□ 0.23
VPS33B-205ENST00000556096 CTNND2Q9UQB3 1225 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
VPS33B-205ENST00000556096 STX17P56962 302 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 ASIC1P78348 528 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 STIM1Q13586 685 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 ECM1Q16610 540 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
VPS33B-205ENST00000556096 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 EXOC1Q9NV70 894 aa16.47■□□□□ 0.23
VPS33B-205ENST00000556096 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
VPS33B-205ENST00000556096 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 MYMKA6NI61 221 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 VWA5AO00534 786 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 HSPA6P17066 643 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 MKRN3Q13064 507 aaKnown RBP16.46■□□□□ 0.23
VPS33B-205ENST00000556096 UNC13DQ70J99 1090 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 KCNK18Q7Z418 384 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 NELFBQ8WX92 580 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
VPS33B-205ENST00000556096 RAVER2Q9HCJ3 691 aaKnown RBP16.46■□□□□ 0.23
VPS33B-205ENST00000556096 ADAMTS5Q9UNA0 930 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 AFG3L2Q9Y4W6 797 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 RPTORQ8N122 1335 aa16.46■□□□□ 0.23
VPS33B-205ENST00000556096 ALAS1P13196 640 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 RPA1P27694 616 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 OAZ1P54368 228 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 PDE4DQ08499 809 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CEP55Q53EZ4 464 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 SH3D19Q5HYK7 790 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 LRRC8AQ8IWT6 810 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CPXCR1Q8N123 301 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CYP2W1Q8TAV3 490 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CACTINQ8WUQ7 758 aaKnown RBP16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 DHTKD1Q96HY7 919 aaPredicted RBP16.45■□□□□ 0.22
VPS33B-205ENST00000556096 ELP3Q9H9T3 547 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 VAV3Q9UKW4 847 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CSADQ9Y600 493 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 TLL2Q9Y6L7 1015 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 MEIS1O00470 390 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 NFIBO00712 420 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 DSG3P32926 999 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 HMGCS2P54868 508 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
VPS33B-205ENST00000556096 TPD52L1Q16890 204 aaPredicted RBP16.45■□□□□ 0.22
VPS33B-205ENST00000556096 TMC6Q7Z403 805 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 VSTM4Q8IW00 320 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 KIAA1524Q8TCG1 905 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 SLC5A5Q92911 643 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 TMOD4Q9NZQ9 345 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 KIAA1024Q9UPX6 916 aa16.45■□□□□ 0.22
VPS33B-205ENST00000556096 PSMA7O14818 248 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 MED24O75448 989 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 STAT3P40763 770 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 SPAG1Q07617 926 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 PSMD2Q13200 908 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 COG2Q14746 738 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 NCAPH2Q6IBW4 605 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 APTXQ7Z2E3 356 aaKnown RBP16.44■□□□□ 0.22
VPS33B-205ENST00000556096 ANKRD13AQ8IZ07 590 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 REPS2Q8NFH8 660 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 POLR3CQ9BUI4 534 aaPredicted RBP16.44■□□□□ 0.22
VPS33B-205ENST00000556096 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 MYPNQ86TC9 1320 aa16.44■□□□□ 0.22
VPS33B-205ENST00000556096 A0A1B0GTH6 734 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 LRRC10BA6NIK2 292 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 PSMD10O75832 226 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 BCRP11274 1271 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 NR1I3Q14994 352 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 MUM1L1Q5H9M0 696 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 CYP4F22Q6NT55 531 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 CATSPER3Q86XQ3 398 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 CCDC150Q8NCX0 1101 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 DDX12PQ92771 950 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 UIMC1Q96RL1 719 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 MXRA8Q9BRK3 442 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 MAF1Q9H063 256 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms