RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 OTOFQ9HC10 1997 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 CYP2D7A0A087X1C5 515 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 GOLGA6L4A6NEF3 574 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 FIBPO43427 364 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 TLR2O60603 784 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 LETM1O95202 739 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 POLR3DP05423 398 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 ADRB1P08588 477 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 FDPSP14324 419 aaKnown RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 FKBP1AP62942 108 aaKnown RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 RESTQ13127 1097 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF211Q13398 564 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 RTN1Q16799 776 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 IFIT1BQ5T764 474 aaKnown RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 C12orf60Q5U649 245 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 LRSAM1Q6UWE0 723 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 CATIPQ7Z7H3 387 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF444Q8N0Y2 327 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 SPATA18Q8TC71 538 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 GPT2Q8TD30 523 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 TGFBRAP1Q8WUH2 860 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 SPATA32Q96LK8 384 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 ZKSCAN3Q9BRR0 538 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 MKNK2Q9HBH9 465 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
SLIRP-204ENST00000555890 TACC3Q9Y6A5 838 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 GAKO14976 1311 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 LRRC37A2A6NM11 1700 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 TSPY2A6NKD2 308 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 H0Y858 1186 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ADCY3O60266 1144 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 CYP2D6P10635 497 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 IFNAR1P17181 557 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 MAPK1P28482 360 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF445P59923 1031 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 AKAP17AQ02040 695 aaKnown RBP7.84□□□□□ -1.15
SLIRP-204ENST00000555890 SEC23AQ15436 765 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 GRIK5Q16478 980 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 KIAA0319Q5VV43 1072 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 BRAPQ7Z569 592 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 RAB11FIP4Q86YS3 637 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 APOBEC3FQ8IUX4 373 aaKnown RBP7.84□□□□□ -1.15
SLIRP-204ENST00000555890 MAPKAPK5Q8IW41 473 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ZSCAN29Q8IWY8 852 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF654Q8IZM8 581 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 FANCBQ8NB91 859 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 FBXO18Q8NFZ0 1043 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 TPCN2Q8NHX9 752 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 NUP133Q8WUM0 1156 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ASB16Q96NS5 453 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ALG1Q9BT22 464 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 MRIQ9BWK5 157 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 TLR9Q9NR96 1032 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 RBM28Q9NW13 759 aaKnown RBP7.84□□□□□ -1.15
SLIRP-204ENST00000555890 TTF2Q9UNY4 1162 aaKnown RBP7.84□□□□□ -1.15
SLIRP-204ENST00000555890 ECM29Q5VYK3 1845 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 SPTBN2O15020 2390 aa7.84□□□□□ -1.15
SLIRP-204ENST00000555890 MYH8P13535 1937 aa7.84□□□□□ -1.16
SLIRP-204ENST00000555890 ROBO3Q96MS0 1386 aa7.84□□□□□ -1.16
SLIRP-204ENST00000555890 FSD2A1L4K1 749 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 GADD45BO75293 160 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 PRDM1O75626 825 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 DDAH1O94760 285 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 XBP1P17861 261 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 RXRAP19793 462 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 CDC27P30260 824 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 HDLBPQ00341 1268 aaKnown RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 GNL2Q13823 731 aaKnown RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 COL19A1Q14993 1142 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 SAFBQ15424 915 aaKnown RBP eCLIP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 ZSCAN23Q3MJ62 389 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 STRIP1Q5VSL9 837 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 HHIPL2Q6UWX4 724 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 C17orf99Q6UX52 265 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 TTC6Q86TZ1 520 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 DGKHQ86XP1 1220 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 CCDC144CPQ8IYA2 1237 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 ENAHQ8N8S7 591 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 CTCFLQ8NI51 663 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 GTF3C2Q8WUA4 911 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 LEO1Q8WVC0 666 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 TEKT1Q969V4 418 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 OPTNQ96CV9 577 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 MYL10Q9BUA6 226 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 SLC26A6Q9BXS9 759 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 ALG13Q9NP73 1137 aaKnown RBP7.83□□□□□ -1.16
SLIRP-204ENST00000555890 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 DAGLAQ9Y4D2 1042 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 PCDHGA11Q9Y5H2 935 aa7.83□□□□□ -1.16
SLIRP-204ENST00000555890 SFI1A8K8P3 1242 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 F8W031 263 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-204ENST00000555890 PPP1R12BO60237 982 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-204ENST00000555890 DEXIO95424 95 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 TSPY3P0CV98 308 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms