RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 CLEC4DQ8WXI8 215 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 TRIM47Q96LD4 638 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 HOMER2Q9NSB8 354 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 SBF1O95248 1867 aa20.58■□□□□ 0.88
GABRB3-209ENST00000555632 ABCB11O95342 1321 aa20.58■□□□□ 0.88
GABRB3-209ENST00000555632 KDM3AQ9Y4C1 1321 aa20.58■□□□□ 0.88
GABRB3-209ENST00000555632 EML1O00423 815 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 PTPRAP18433 802 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 RAD51AP2Q09MP3 1159 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 SEMA3FQ13275 785 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 PRKG1Q13976 671 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 DCAF15Q66K64 600 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 CNNM4Q6P4Q7 775 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 APOBEC3FQ8IUX4 373 aaKnown RBP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 FAM20AQ96MK3 541 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 NT5C3AQ9H0P0 336 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 TMX1Q9H3N1 280 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 RPAP3Q9H6T3 665 aaPredicted RBP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 DOCK1Q14185 1865 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 SSC5DA1L4H1 1573 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 DICER1Q9UPY3 1922 aaKnown RBP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 PLA2G4BP0C869 781 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 COPB1P53618 953 aaKnown RBP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 CYP4A11Q02928 519 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 EHHADHQ08426 723 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 MUM1L1Q5H9M0 696 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 TMEM139Q8IV31 216 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 P2RX5Q93086 422 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 CCDC47Q96A33 483 aaKnown RBP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 DHTKD1Q96HY7 919 aaPredicted RBP20.57■□□□□ 0.88
GABRB3-209ENST00000555632 CTAGE1Q96RT6 745 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 SEMA6BQ9H3T3 888 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 SLC38A10Q9HBR0 1119 aa20.57■□□□□ 0.88
GABRB3-209ENST00000555632 PVALEFA0A1B0GWK0 134 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 ALAS1P13196 640 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 LRRC41Q15345 812 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 N4BP3O15049 544 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 CCNE1P24864 410 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 BACE1P56817 501 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 CCAR2Q8N163 923 aaKnown RBP20.56■□□□□ 0.88
GABRB3-209ENST00000555632 FGFBP2Q9BYJ0 223 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 RGL1Q9NZL6 768 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 ZHX2Q9Y6X8 837 aa20.56■□□□□ 0.88
GABRB3-209ENST00000555632 ARP10275 920 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 HSD17B4P51659 736 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 ARSHQ5FYA8 562 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 CSGALNACT2Q8N6G5 542 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 KLRG1Q96E93 195 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 GINM1Q9NU53 330 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 PPP1R9AQ9ULJ8 1098 aa20.55■□□□□ 0.88
GABRB3-209ENST00000555632 RPA1P27694 616 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 SLC12A3P55017 1021 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 RBL2Q08999 1139 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 HAUS3Q68CZ6 603 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 ZNF280CQ8ND82 737 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 IL31RAQ8NI17 732 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 CPLX3Q8WVH0 158 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.54■□□□□ 0.88
GABRB3-209ENST00000555632 CYP11B2P19099 503 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 HMGCS2P54868 508 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 COASYQ13057 564 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 FILIP1LQ4L180 1135 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 CEP55Q53EZ4 464 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 OTOP1Q7RTM1 612 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 GPBP1Q86WP2 473 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 ATG4CQ96DT6 458 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 PICK1Q9NRD5 415 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 TBC1D7Q9P0N9 293 aa20.54■□□□□ 0.88
GABRB3-209ENST00000555632 CHMP2AO43633 222 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 PSMD10O75832 226 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 SPAG1Q07617 926 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 PABPC4Q13310 644 aaKnown RBP eCLIP20.53■□□□□ 0.88
GABRB3-209ENST00000555632 COBLL1Q53SF7 1204 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 EIF2AK1Q9BQI3 630 aaKnown RBP20.53■□□□□ 0.88
GABRB3-209ENST00000555632 THAP9Q9H5L6 903 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 PANK4Q9NVE7 773 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 LRCH2Q5VUJ6 765 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 CENPPQ6IPU0 288 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 PURBQ96QR8 312 aaKnown RBP20.53■□□□□ 0.88
GABRB3-209ENST00000555632 RIPK3Q9Y572 518 aa20.53■□□□□ 0.88
GABRB3-209ENST00000555632 RNF225M0QZC1 329 aaPredicted RBP20.52■□□□□ 0.88
GABRB3-209ENST00000555632 GYPCP04921 128 aa20.52■□□□□ 0.88
GABRB3-209ENST00000555632 ITGB5P18084 799 aa20.52■□□□□ 0.88
GABRB3-209ENST00000555632 USP14P54578 494 aa20.52■□□□□ 0.88
GABRB3-209ENST00000555632 LRRC27Q9C0I9 530 aa20.52■□□□□ 0.88
GABRB3-209ENST00000555632 POLD4Q9HCU8 107 aa20.52■□□□□ 0.88
GABRB3-209ENST00000555632 PARP14Q460N5 1801 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 VWA5AO00534 786 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 TNNT1P13805 278 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
GABRB3-209ENST00000555632 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
GABRB3-209ENST00000555632 CTTNQ14247 550 aaKnown RBP20.51■□□□□ 0.87
GABRB3-209ENST00000555632 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 ERMNQ8TAM6 284 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 SLC5A5Q92911 643 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 BCAS3Q9H6U6 928 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 PHIPQ8WWQ0 1821 aa20.51■□□□□ 0.87
GABRB3-209ENST00000555632 BICDL2A1A5D9 508 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms