RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 RNF112Q9ULX5 631 aa5.28□□□□□ -1.56
CPSF2-204ENST00000555244 ATP6V0A2Q9Y487 856 aa5.28□□□□□ -1.56
CPSF2-204ENST00000555244 LAS1LQ9Y4W2 734 aaKnown RBP5.28□□□□□ -1.56
CPSF2-204ENST00000555244 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
CPSF2-204ENST00000555244 ANKRD36CQ5JPF3 1778 aa5.28□□□□□ -1.56
CPSF2-204ENST00000555244 WDR90Q96KV7 1748 aa5.28□□□□□ -1.56
CPSF2-204ENST00000555244 TNRC6CQ9HCJ0 1690 aaKnown RBP5.28□□□□□ -1.56
CPSF2-204ENST00000555244 PCNTO95613 3336 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 FAM95CA0A1B0GW59 222 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 NPHP1O15259 732 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 LRIG2O94898 1065 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 PCCAP05165 728 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 NFICP08651 508 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 RAG1P15918 1043 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 HSPA6P17066 643 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 GUCY2CP25092 1073 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 CHMP4BP1P59074 171 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 AIMP1Q12904 312 aaKnown RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 GRAPQ13588 217 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 TWISTNBQ3B726 338 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 ARSHQ5FYA8 562 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 CDCP2Q5VXM1 449 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 INTS3Q68E01 1043 aaKnown RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 OVOS1Q6IE37 1185 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 PAOXQ6QHF9 649 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 KSR2Q6VAB6 950 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 ANKS3Q6ZW76 656 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 NLRC3Q7RTR2 1065 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 LSRQ86X29 649 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 FAM20CQ8IXL6 584 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 SLFN12Q8IYM2 578 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 PHACTR4Q8IZ21 702 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 SYNE4Q8N205 404 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 C19orf47Q8N9M1 422 aaKnown RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 MFSD2AQ8NA29 543 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 GRAPLQ8TC17 118 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 ATG4CQ96DT6 458 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 DNAJC2Q99543 621 aaKnown RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 TRIM55Q9BYV6 548 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 FOXQ1Q9C009 403 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 SEMA6CQ9H3T2 930 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 PHAXQ9H814 394 aaKnown RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 FBRSQ9HAH7 460 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 NMRK2Q9NPI5 230 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 PCMTD2Q9NV79 361 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 TRMT112Q9UI30 125 aaKnown RBP5.27□□□□□ -1.57
CPSF2-204ENST00000555244 CACNA1FO60840 1977 aa5.27□□□□□ -1.57
CPSF2-204ENST00000555244 ABCC4O15439 1325 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CDHR2Q9BYE9 1310 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 FANCIQ9NVI1 1328 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 HMX2A2RU54 273 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CHURC1-FNTBB4DL54 471 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 ELL2O00472 640 aaPredicted RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 SMAD7O15105 426 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 DDX58O95786 925 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CST3P01034 146 aaPredicted RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 IGLV1-40P01703 118 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 IGKV5-2P06315 115 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 NME1P15531 152 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 GBP1P32455 592 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CCNFP41002 786 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 IARSP41252 1262 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CASP7P55210 303 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 SLBPQ14493 270 aaKnown RBP eCLIP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 NFKBIBQ15653 356 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 PPP2R5EQ16537 467 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 PRAMEF13Q5VWM6 474 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 BEND4Q6ZU67 534 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CLEC10AQ8IUN9 316 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 TRMT2AQ8IZ69 625 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 DNAJC5GQ8N7S2 189 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 RPGRQ92834 1020 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 TSR2Q969E8 191 aaKnown RBP5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CCDC74BQ96LY2 380 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 PLA2G12BQ9BX93 195 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 ANTXR1Q9H6X2 564 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CNNM2Q9H8M5 875 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 ACTR10Q9NZ32 417 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 RTL9Q8NET4 1388 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 CCDC88AQ3V6T2 1871 aa5.26□□□□□ -1.57
CPSF2-204ENST00000555244 PI4KAP2A4QPH2 592 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 UPK3BL1B0FP48 263 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 UPK3BL2E5RIL1 263 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 IRS4O14654 1257 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-204ENST00000555244 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 TGFB1P01137 390 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 KIAA2012Q0VF49 1180 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 NKG7Q16617 165 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 ZNF746Q6NUN9 644 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-204ENST00000555244 OLFM4Q6UX06 510 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 DDX46Q7L014 1031 aaKnown RBP5.25□□□□□ -1.57
CPSF2-204ENST00000555244 ARMCX6Q7L4S7 300 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 GPC2Q8N158 579 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 PI4KAP1Q8N8J0 262 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 SUPT20HQ8NEM7 779 aa5.25□□□□□ -1.57
CPSF2-204ENST00000555244 ZNF526Q8TF50 670 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-204ENST00000555244 CYB5D2Q8WUJ1 264 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms