RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
XRCC3-208ENST00000554811 TUBB2BQ9BVA1 445 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 ZBTB21Q9ULJ3 1066 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 ZNF263O14978 683 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 HOXA13P31271 388 aaPredicted RBP13.09□□□□□ -0.31
XRCC3-208ENST00000554811 PACSIN1Q9BY11 444 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 CCSER1Q9C0I3 900 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 LUC7LQ9NQ29 371 aaKnown RBP13.09□□□□□ -0.31
XRCC3-208ENST00000554811 GOLGA6L10A6NI86 522 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
XRCC3-208ENST00000554811 GDF11O95390 407 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 CNPY4Q8N129 248 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 DNAJC7Q99615 494 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 SPATA31A1Q5TZJ5 1347 aa13.08□□□□□ -0.31
XRCC3-208ENST00000554811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 PRPF6O94906 941 aaKnown RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 GRB10Q13322 594 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 SHROOM1Q2M3G4 852 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 CCDC84Q86UT8 332 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 KSR1Q8IVT5 923 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 ZC3H12CQ9C0D7 883 aaKnown RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 JRKLQ9Y4A0 524 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 TLDC2A0PJX2 215 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 LRRC10BA6NIK2 292 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 PSMD14O00487 310 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 EBAG9O00559 213 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 AMPD2Q01433 879 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 UBLCP1Q8WVY7 318 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 FGFBP2Q9BYJ0 223 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 TSGA10Q9BZW7 698 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 MED4Q9NPJ6 270 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 PPANQ9NQ55 473 aaKnown RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 SNX12Q9UMY4 172 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 FLT1P17948 1338 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 EIF3CLB5ME19 914 aaKnown RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 KIAA0754O94854 1291 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 NR2F2P24468 414 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 ASIC2Q16515 512 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 EIF3CQ99613 913 aaKnown RBP13.08□□□□□ -0.32
XRCC3-208ENST00000554811 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.32
XRCC3-208ENST00000554811 A0A1W2PQC6 194 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 GCNT3O95395 438 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 COASYQ13057 564 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 KCNB1Q14721 858 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 TTC31Q49AM3 519 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 SRLQ86TD4 932 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 ZNF507Q8TCN5 953 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CAPS2Q9BXY5 557 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 RAB21Q9UL25 225 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 COL18A1P39060 1754 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 HGSO14964 777 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CARSP49589 748 aaKnown RBP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 TRADDQ15628 312 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 DBNDD1Q9H9R9 158 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CEP85LQ5SZL2 805 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CCNI2Q6ZMN8 369 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-208ENST00000554811 TAX1BP1Q86VP1 789 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CCDC170Q8IYT3 715 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 CUL5Q93034 780 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 COL4A3BPQ9Y5P4 624 aa13.07□□□□□ -0.32
XRCC3-208ENST00000554811 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 DCCP43146 1447 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 PIGOQ8TEQ8 1089 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 AK8Q96MA6 479 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 CETN3O15182 167 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 TBCAO75347 108 aaKnown RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 GRAPQ13588 217 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 UNC13DQ70J99 1090 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms