RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 HESX1Q9UBX0 185 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 RPAP1Q9BWH6 1393 aaPredicted RBP15.14■□□□□ 0.01
VTI1B-204ENST00000554659 CXCR5P32302 372 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 CUL1Q13616 776 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 SGO2Q562F6 1265 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 NDST4Q9H3R1 872 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 LEMD3Q9Y2U8 911 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 TTLL1O95922 423 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 MAPK4P31152 587 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 YWHAGP61981 247 aaKnown RBP eCLIP15.14■□□□□ 0.01
VTI1B-204ENST00000554659 TOB2Q14106 344 aaPredicted RBP15.14■□□□□ 0.01
VTI1B-204ENST00000554659 KMT5BQ4FZB7 885 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 RSPH3Q86UC2 560 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 ARHGEF25Q86VW2 580 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 HACE1Q8IYU2 909 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 METP08581 1390 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
VTI1B-204ENST00000554659 NEK9Q8TD19 979 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
VTI1B-204ENST00000554659 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
VTI1B-204ENST00000554659 SPDL1Q96EA4 605 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
VTI1B-204ENST00000554659 LMTK3Q96Q04 1460 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
VTI1B-204ENST00000554659 GLE1Q53GS7 698 aaKnown RBP15.13■□□□□ 0.01
VTI1B-204ENST00000554659 NIM1KQ8IY84 436 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 CCHCR1Q8TD31 782 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 ACCSQ96QU6 501 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 MLXIPQ9HAP2 919 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 XDHP47989 1333 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 JADE1Q6IE81 842 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
VTI1B-204ENST00000554659 TCP11Q8WWU5 503 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 PRKAB2O43741 272 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 PLCG1P19174 1290 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 CNGA1P29973 690 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
VTI1B-204ENST00000554659 ABCB5Q2M3G0 1257 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 KLHL29Q96CT2 875 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 WDR11Q9BZH6 1224 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
VTI1B-204ENST00000554659 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 GCNT4Q9P109 453 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 KRT3P12035 628 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 ANKFY1Q9P2R3 1169 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 ANAPC5Q9UJX4 755 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
VTI1B-204ENST00000554659 CACYBPQ9HB71 228 aaKnown RBP15.12■□□□□ 0.01
VTI1B-204ENST00000554659 DISC1Q9NRI5 854 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 EMILIN3Q9NT22 766 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 TXLNGQ9NUQ3 528 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 H7C0C1 242 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SGK1O00141 431 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 ATP5OP48047 213 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 POLGP54098 1239 aaPredicted RBP15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 NACA2Q9H009 215 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 MRPL46Q9H2W6 279 aaKnown RBP15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SLAIN2Q9P270 581 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 STK36Q9NRP7 1315 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 M0QZ92 97 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
VTI1B-204ENST00000554659 GSTA1P08263 222 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 GSTA2P09210 222 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 ARID5BQ14865 1188 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 TAB3Q8N5C8 712 aaPredicted RBP15.12■□□□□ 0.01
VTI1B-204ENST00000554659 AIFM3Q96NN9 605 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 ADPGKQ9BRR6 497 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 TUBB6Q9BUF5 446 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 ZNF277Q9NRM2 450 aaPredicted RBP15.12■□□□□ 0.01
VTI1B-204ENST00000554659 BAG5Q9UL15 447 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 PTPREP23469 700 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 CYP27A1Q02318 531 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 NLRP7Q8WX94 980 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 PGBD1Q96JS3 809 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 PIGSQ96S52 555 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 HAUS8Q9BT25 410 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SH3GLB2Q9NR46 395 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 MAD1L1Q9Y6D9 718 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 GOLGA8QA0A0J9YX86 632 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 PRAMEF22A3QJZ6 481 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 GOLGA8OA6NCC3 632 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 GOLGA8NF8WBI6 632 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SCNN1DP51172 638 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 PPP2R5AQ15172 486 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 PI16Q6UXB8 463 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 SDCCAG3Q96C92 435 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 NACC1Q96RE7 527 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 MMS19Q96T76 1030 aa15.12■□□□□ 0.01
VTI1B-204ENST00000554659 FMO2Q99518 471 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms