RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 FRMD6Q96NE9 622 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 IPO9Q96P70 1041 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 PARK7Q99497 189 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 MAP3K14Q99558 947 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 RWDD1Q9H446 243 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ELP3Q9H9T3 547 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 PPP1R9AQ9ULJ8 1098 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 CSADQ9Y600 493 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ORC4O43929 436 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PDE8BO95263 885 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 OSBPP22059 807 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 ENPP1P22413 925 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 DNAJB2P25686 324 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 NOS2P35228 1153 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 FCGRTP55899 365 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 CHMP4BP1P59074 171 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 RACK1P63244 317 aaKnown RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 UBXN2AP68543 259 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 C21orf62-AS1Q17RA5 79 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 INF2Q27J81 1249 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 CCDC57Q2TAC2 916 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 COBLL1Q53SF7 1204 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 MFSD14BQ5SR56 506 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 IFNL3Q8IZI9 196 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 SMCR8Q8TEV9 937 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 GTF3C2Q8WUA4 911 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 SH3GLB2Q9NR46 395 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 AFG3L2Q9Y4W6 797 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PCDHAC2Q9Y5I4 1007 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 N6AMT1Q9Y5N5 214 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PRMT3O60678 531 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 GPR37L1O60883 481 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 CDC45O75419 566 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 AP1G2O75843 785 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 SGPL1O95470 568 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 OATP04181 439 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 NCAM1P13591 858 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 GRK4P32298 578 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 RAB27AP51159 221 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 KRT76Q01546 638 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 SLC7A5Q01650 507 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 TRIM32Q13049 653 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PUM3Q15397 648 aaKnown RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 MAP3K21Q5TCX8 1036 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 CFAP161Q6P656 301 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 LMBR1LQ6UX01 489 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 DGKHQ86XP1 1220 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 OR8H2Q8N162 312 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PPHLN1Q8NEY8 458 aaKnown RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 GABPB2Q8TAK5 448 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 TIFAQ96CG3 184 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PGBD4Q96DM1 585 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 GDF15Q99988 308 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 SLKQ9H2G2 1235 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 TDRD3Q9H7E2 651 aaKnown RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 DCAF16Q9NXF7 216 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 UTP6Q9NYH9 597 aaKnown RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 MORF4L1Q9UBU8 362 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 PARP2Q9UGN5 583 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 SNX5Q9Y5X3 404 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 V9GYY5 206 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-206ENST00000554429 MYPNQ86TC9 1320 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 ROBO3Q96MS0 1386 aa3.1□□□□□ -1.91
PRPF39-206ENST00000554429 ESYT3A0FGR9 886 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 GTPBP10A4D1E9 387 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 PRRT4C9JH25 899 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 CTNND1O60716 968 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 LGR5O75473 907 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 CCL5P13501 91 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TNNT1P13805 278 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 CAMK2BQ13554 666 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 GNL2Q13823 731 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 PTPN14Q15678 1187 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TKFCQ3LXA3 575 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.09□□□□□ -1.912e-18■■■■■ 41.1
PRPF39-206ENST00000554429 ZMYM1Q5SVZ6 1142 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 C20orf194Q5TEA3 1177 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 KIAA1614Q5VZ46 1190 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 LDHAL6AQ6ZMR3 332 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TAX1BP1Q86VP1 789 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SCYL3Q8IZE3 742 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SPICE1Q8N0Z3 855 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 CPXCR1Q8N123 301 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 STAG2Q8N3U4 1231 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 ZGPATQ8N5A5 531 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TTC8Q8TAM2 541 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SH3TC2Q8TF17 1288 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 LPIN2Q92539 896 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 USP6NLQ92738 828 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SUCLG2Q96I99 432 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SERINC2Q96SA4 455 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SMAD5Q99717 465 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.09□□□□□ -1.914e-8■■■■□ 20.1
PRPF39-206ENST00000554429 POLR3CQ9BUI4 534 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TMEM39BQ9GZU3 492 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 OSBPL5Q9H0X9 879 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 ALG2Q9H553 416 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 NGRNQ9NPE2 291 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 DIAPH3Q9NSV4 1193 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TMOD2Q9NZR1 351 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms