RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CAVIN1Q6NZI2 390 aaKnown RBP6.99□□□□□ -1.29
VPS33B-203ENST00000554264 ERMP1Q7Z2K6 904 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 UBE3DQ7Z6J8 389 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 GATA6Q92908 595 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 RSRP1Q9BUV0 290 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 TSPY26PQ9H489 355 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 ZNF408Q9H9D4 720 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 C1GALT1Q9NS00 363 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 SAGE1Q9NXZ1 904 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 PODXL2Q9NZ53 605 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 ZNRF3Q9ULT6 936 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 RECKO95980 971 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 IGLV1-40P01703 118 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 PF4P02776 101 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 GNAI2P04899 355 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 SDSP20132 328 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 GMPSP49915 693 aaPredicted RBP6.98□□□□□ -1.29
VPS33B-203ENST00000554264 HUNKP57058 714 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 CXCL9Q07325 125 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 TNIP1Q15025 636 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 AOC3Q16853 763 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 KIF6Q6ZMV9 814 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 PLPPR2Q96GM1 343 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 PHACTR3Q96KR7 559 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 RHOVQ96L33 236 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 GLIS2Q9BZE0 524 aaPredicted RBP6.98□□□□□ -1.29
VPS33B-203ENST00000554264 ATXN3LQ9H3M9 355 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 STAP2Q9UGK3 403 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 ATP6V0A2Q9Y487 856 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 MAP3K15Q6ZN16 1313 aa6.98□□□□□ -1.29
VPS33B-203ENST00000554264 MINDY4BA8MYZ0 360 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 H7C1D1 291 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 GFRA2O00451 464 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 RAB11FIP3O75154 756 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 GARTP22102 1010 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
VPS33B-203ENST00000554264 HSP90AB4PQ58FF6 505 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
VPS33B-203ENST00000554264 CYFIP1Q7L576 1253 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 MCM10Q7L590 875 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 PPP1R42Q7Z4L9 355 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 ZDHHC13Q8IUH4 622 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 C8orf58Q8NAV2 365 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 RNF214Q8ND24 703 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 JARID2Q92833 1246 aaPredicted RBP6.97□□□□□ -1.29
VPS33B-203ENST00000554264 ISL2Q96A47 359 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 PKNOX2Q96KN3 472 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 MFSD14AQ96MC6 490 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 TMEM74Q96NL1 305 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 STK31Q9BXU1 1019 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 RTFDC1Q9BY42 306 aaPredicted RBP6.97□□□□□ -1.29
VPS33B-203ENST00000554264 LRRCC1Q9C099 1032 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 KBTBD4Q9NVX7 518 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 PRKAG2Q9UGJ0 569 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
VPS33B-203ENST00000554264 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.97□□□□□ -1.29
VPS33B-203ENST00000554264 PRR19A6NJB7 356 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 RNGTTO60942 597 aaKnown RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 NTSR2O95665 410 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 F13BP05160 661 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 GPTP24298 496 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 PDE1AP54750 535 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 SOX10P56693 466 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 LMNB2Q03252 620 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 TAF7Q15545 349 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 TSNAXIP1Q2TAA8 658 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 PARP10Q53GL7 1025 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 SUSD4Q5VX71 490 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 RGMBQ6NW40 437 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 DPP8Q6V1X1 898 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 SMAP1Q8IYB5 467 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 SMYD4Q8IYR2 804 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 ZNF34Q8IZ26 560 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 TSPYL6Q8N831 410 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 C2orf69Q8N8R5 385 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 MRRFQ96E11 262 aaKnown RBP6.96□□□□□ -1.3
VPS33B-203ENST00000554264 PSMG3-AS1Q96PY0 264 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 USP25Q9UHP3 1055 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 UBN2Q6ZU65 1347 aa6.96□□□□□ -1.3
VPS33B-203ENST00000554264 FAM221AA4D161 298 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 BBOX1O75936 387 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CAVIN2O95810 425 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 F13A1P00488 732 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 PTMAP06454 111 aaKnown RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 HOXB7P09629 217 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 MX1P20591 662 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 VAMP1P23763 118 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 GTF2F1P35269 517 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 NEK4P51957 841 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 FANCCQ00597 558 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CHAF1AQ13111 956 aaPredicted RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 WIPI1Q5MNZ9 446 aaPredicted RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CCDC183Q5T5S1 534 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 ZBTB37Q5TC79 503 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CCDC30Q5VVM6 783 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 PAOXQ6QHF9 649 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms