RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ADCK5Q3MIX3 580 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 WWC2Q6AWC2 1192 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NCAPH2Q6IBW4 605 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 KIAA1841Q6NSI8 718 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PLA2G4DQ86XP0 818 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CEP57Q86XR8 500 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TPH2Q8IWU9 490 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 LRRC71Q8N4P6 559 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM199Q8N511 208 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MB21D1Q8N884 522 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PXYLP1Q8TE99 480 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SCFD2Q8WU76 684 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NECAB3Q96P71 396 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 WDR18Q9BV38 432 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ANO3Q9BYT9 981 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TBC1D2Q9BYX2 928 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 IL25Q9H293 177 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 BCAS3Q9H6U6 928 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PRDM6Q9NQX0 595 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 IL17RBQ9NRM6 502 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ORC3Q9UBD5 711 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 COL1A1P02452 1464 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TUBGCP6Q96RT7 1819 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PKD1L3Q7Z443 1732 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF609O15014 1411 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 A0A0U1RQG5 324 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MSCO60682 206 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 LPXNO60711 386 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 GSPT1P15170 499 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ATP2A2P16615 1042 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PSMA5P28066 241 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 GUCY1A2P33402 732 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MCM7P33993 719 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TXKP42681 527 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TFF2Q03403 129 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 FPGSQ05932 587 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SSRP1Q08945 709 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TBC1D8BQ0IIM8 1120 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 KIZQ2M2Z5 673 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 GPATCH4Q5T3I0 446 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TWF2Q6IBS0 349 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SWSAP1Q6NVH7 229 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 LLGL2Q6P1M3 1020 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PIK3AP1Q6ZUJ8 805 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CENPQQ7L2Z9 268 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MCF2L2Q86YR7 1114 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 EXOC8Q8IYI6 725 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PDILTQ8N807 584 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CYP2W1Q8TAV3 490 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NLRP7Q8WX94 980 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CDK5RAP3Q96JB5 506 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 RPGRIP1Q96KN7 1286 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MRIQ9BWK5 157 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SLITRK6Q9H5Y7 841 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 BRMS1Q9HCU9 246 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 C6orf50Q9HD87 102 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 IGSF5Q9NSI5 407 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PPP4R2Q9NY27 417 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NYAP2Q9P242 653 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 HDAC6Q9UBN7 1215 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TJP1Q07157 1748 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SHANK3Q9BYB0 1731 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CASZ1Q86V15 1759 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 COL4A1P02462 1669 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 A0A1W2PQ45 241 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 A0A1W2PQY0 241 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 H3BRB1 525 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 INO80B-WBP1J3KQ70 363 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MEIS1O00470 390 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PER2O15055 1255 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 GAS7O60861 476 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CA3P07451 260 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ACTN1P12814 892 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CDC25AP30304 524 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MMP14P50281 582 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PRMT2P55345 433 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 BCAR1P56945 870 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF543Q08ER8 600 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 MTMR1Q13613 665 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 BTG3Q14201 252 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 INF2Q27J81 1249 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 HSDL1Q3SXM5 330 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PPP4R3BQ5MIZ7 849 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 DPH6Q7L8W6 267 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TMC7Q7Z402 723 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TTC30AQ86WT1 665 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TDHQ8IZJ6 230 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 DBF4BQ8NFT6 615 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 KCNG4Q8TDN1 519 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 DNAJB3Q8WWF6 145 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 ERLEC1Q96DZ1 483 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 FAM193BQ96PV7 902 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.85□□□□□ -1.954e-8■■■■□ 20.1
PRPF39-205ENST00000554081 SDF4Q9BRK5 362 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 INO80BQ9C086 356 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NKX2-4Q9H2Z4 354 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 TUT1Q9H6E5 874 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SLC24A3Q9HC58 644 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CXXC1Q9P0U4 656 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms