RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 THAP9Q9H5L6 903 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 TRPV5Q9NQA5 729 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CABP1Q9NZU7 370 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 SAMD15Q9P1V8 674 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CAPN11Q9UMQ6 739 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 TRIM33Q9UPN9 1127 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 EDC4Q6P2E9 1401 aaKnown RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 PIK3C2AO00443 1686 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 WNK3Q9BYP7 1800 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 ZNF263O14978 683 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 HNRNPRO43390 633 aaKnown RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 PFDN1O60925 122 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CTNNA1P35221 906 aaKnown RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 CACNA2D1P54289 1103 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 OXCT1P55809 520 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 ZC3H6P61129 1189 aaKnown RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 CDK17Q00537 523 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 GRIN1Q05586 938 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 SF3A3Q12874 501 aaKnown RBP eCLIP10.45□□□□□ -0.74
SIX4-202ENST00000554079 TMEM110Q86TL2 294 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 RMDN2Q96LZ7 410 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.45□□□□□ -0.74
SIX4-202ENST00000554079 MTFR1LQ9H019 292 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 MLXIPQ9HAP2 919 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 LRRC4CQ9HCJ2 640 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 RMND1Q9NWS8 449 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 HPS5Q9UPZ3 1129 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 EID1Q9Y6B2 187 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 A0A0G2JS52 829 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 E7EWF7 191 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 SART1O43290 800 aaKnown RBP10.44□□□□□ -0.74
SIX4-202ENST00000554079 NCK2O43639 380 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 MOCS3O95396 460 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CHGBP05060 677 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 MMEP08473 750 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CCNB1P14635 433 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 IDO1P14902 403 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CHN1P15882 459 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 SPAG1Q07617 926 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 MYBPC2Q14324 1141 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 OLFML1Q6UWY5 402 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CEP128Q6ZU80 1094 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 ZNF365Q70YC5 407 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CCNJLQ8IV13 435 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 MS4A14Q96JA4 679 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 DHRS1Q96LJ7 313 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 PSMB7Q99436 277 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 SPATA16Q9BXB7 569 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 UBA5Q9GZZ9 404 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 ISCUQ9H1K1 167 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 ADAM7Q9H2U9 754 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 NHEJ1Q9H9Q4 299 aaPredicted RBP10.44□□□□□ -0.74
SIX4-202ENST00000554079 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
SIX4-202ENST00000554079 INIPQ9NRY2 104 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CTTNBP2NLQ9P2B4 639 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 LRWD1Q9UFC0 647 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 FBXO2Q9UK22 296 aaPredicted RBP10.44□□□□□ -0.74
SIX4-202ENST00000554079 PAIP2BQ9ULR5 123 aaKnown RBP10.44□□□□□ -0.74
SIX4-202ENST00000554079 CTNND2Q9UQB3 1225 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 LRCH1Q9Y2L9 728 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
SIX4-202ENST00000554079 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 NPATQ14207 1427 aa10.44□□□□□ -0.74
SIX4-202ENST00000554079 CPS1P31327 1500 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 CEP104O60308 925 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 SNX3O60493 162 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 ZFXP17010 805 aaPredicted RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 GM2AP17900 193 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 VCAM1P19320 739 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 KCNA3P22001 575 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 VARSP26640 1264 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 PTDSS1P48651 473 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 TCP11X2Q5H9J9 407 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 RC3H1Q5TC82 1133 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 KANK3Q6NY19 840 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 DUS1LQ6P1R4 473 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 GIGYF2Q6Y7W6 1299 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 CHST3Q7LGC8 479 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 LRRC45Q96CN5 670 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 GBP5Q96PP8 586 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 TLR10Q9BXR5 811 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 PUS3Q9BZE2 481 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 CCDC87Q9NVE4 849 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 NLRP2Q9NX02 1062 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 UTP6Q9NYH9 597 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 PDP2Q9P2J9 529 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 SH3GLB1Q9Y371 365 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 NALCNQ8IZF0 1738 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 A0A0J9YVX5 310 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 KCNJ18B7U540 433 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 PRPF3O43395 683 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 RAD51CO43502 376 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms