RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ATF7IPQ6VMQ6 1270 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 TMEM199Q8N511 208 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 SPATA5Q8NB90 893 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 ACER1Q8TDN7 264 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 NUP133Q8WUM0 1156 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 GLMNQ92990 594 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 MAML3Q96JK9 1138 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 RPAP3Q9H6T3 665 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 BRD7Q9NPI1 651 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 COPRSQ9NQ92 184 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 STARD7Q9NQZ5 370 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 AATFQ9NY61 560 aaKnown RBP eCLIP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 PA2G4Q9UQ80 394 aaKnown RBP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 MAFBQ9Y5Q3 323 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 PTPRCP08575 1304 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 FLT1P17948 1338 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 A0A1B0GUL7 405 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 PI4K2BG5E9Z4 385 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 ADAMTS4O75173 837 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 HLA-DOAP06340 250 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 SPATA31C1P0DKV0 1188 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 CDK7P50613 346 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 ACLYP53396 1101 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 RAB3GAP1Q15042 981 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 MICALL1Q8N3F8 863 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 KLHDC9Q8NEP7 349 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 C2orf49Q9BVC5 232 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-224ENST00000554040 MROH8Q9H579 483 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
ATXN3-224ENST00000554040 COG5Q9UP83 839 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
ATXN3-224ENST00000554040 YBX2Q9Y2T7 364 aaKnown RBP8.39□□□□□ -1.07
ATXN3-224ENST00000554040 FRMPD3Q5JV73 1810 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ELP1O95163 1332 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ZNF521Q96K83 1311 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 SMCHD1A6NHR9 2005 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 FAM86C2PA6NEL3 165 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 M0R082 166 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ZNF865P0CJ78 1059 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 TAL1P17542 331 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ALAS2P22557 587 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 MRE11P49959 708 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 KCNA10Q16322 511 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 NAA16Q6N069 864 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ALDH16A1Q8IZ83 802 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 MB21D1Q8N884 522 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 IL23AQ9NPF7 189 aa8.38□□□□□ -1.07
ATXN3-224ENST00000554040 SAP30BPQ9UHR5 308 aaKnown RBP8.38□□□□□ -1.07
ATXN3-224ENST00000554040 MYH13Q9UKX3 1938 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 MROH7Q68CQ1 1323 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 FGBP02675 491 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 UBTFL1P0CB47 393 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-224ENST00000554040 FCER1AP12319 257 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 AKR1A1P14550 325 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-224ENST00000554040 ADH7P40394 386 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 TFCP2Q12800 502 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 CERKLQ49MI3 558 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-224ENST00000554040 NEUROD6Q96NK8 337 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 TINF2Q9BSI4 451 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 CABP5Q9NP86 173 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 DIS3Q9Y2L1 958 aaKnown RBP8.37□□□□□ -1.07
ATXN3-224ENST00000554040 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
ATXN3-224ENST00000554040 REV3LO60673 3130 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 BRWD1Q9NSI6 2320 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 ARVCFO00192 962 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 SLC25A27O95847 323 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 NID1P14543 1247 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 RASA1P20936 1047 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 CYP2C18P33260 490 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 GUCY1A2P33402 732 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 MCAMP43121 646 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 RABGGTBP53611 331 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 DOC2BQ14184 412 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 PLS1Q14651 629 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 ABCB5Q2M3G0 1257 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 ZNF792Q3KQV3 632 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 GORABQ5T7V8 394 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 OTOP2Q7RTS6 562 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 ADGRA1Q86SQ6 560 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 LENG1Q96BZ8 264 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-224ENST00000554040 GLT1D1Q96MS3 346 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 PPP1R12CQ9BZL4 782 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms