RNA–Protein interactions for RNA: ENST00000553929.5

LINC01146-202, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 413 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-202ENST00000553929 TMEM39AQ9NV64 488 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 EXOC1Q9NV70 894 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 NSMCE4AQ9NXX6 385 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 CLIP2Q9UDT6 1046 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 PHTF1Q9UMS5 762 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 SAMM50Q9Y512 469 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 CD2APQ9Y5K6 639 aa4.78□□□□□ -1.64
LINC01146-202ENST00000553929 KIF16BQ96L93 1317 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 hCG_1642624A0A1W2PR95 340 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 FAM221AA4D161 298 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 NDC80O14777 642 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 AREL1O15033 823 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 MUSKO15146 869 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 MBD4O95243 580 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 EYA4O95677 639 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 AGR2O95994 175 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 KRT13P13646 458 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ZSCAN20P17040 1043 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 HOXB4P17483 251 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 IL4RP24394 825 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 USP8P40818 1118 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 CCDC15Q0P6D6 951 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 C19orf57Q0VDD7 668 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 FAAP100Q0VG06 881 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 GTF2H3Q13889 308 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 COL9A3Q14050 684 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 PPP2R5DQ14738 602 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 CLUL1Q15846 466 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 DDR2Q16832 855 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ZNF423Q2M1K9 1284 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 TMEM67Q5HYA8 995 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 GPR158Q5T848 1215 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 RETSATQ6NUM9 610 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 LRRC49Q8IUZ0 686 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ANKRD18AQ8IVF6 992 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ELOA2Q8IYF1 753 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 TAB3Q8N5C8 712 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 PARD3BQ8TEW8 1205 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ZNF606Q8WXB4 792 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 JAKMIP2Q96AA8 810 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 NECAB3Q96P71 396 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 MYD88Q99836 296 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 TREX2Q9BQ50 279 aaPredicted RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ELAC1Q9H777 363 aaKnown RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ZCCHC17Q9NP64 241 aaKnown RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 TRMT13Q9NUP7 481 aaKnown RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ABCF3Q9NUQ8 709 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 KCTD5Q9NXV2 234 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 SLC5A4Q9NY91 659 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 NOP53Q9NZM5 478 aaKnown RBP4.77□□□□□ -1.65
LINC01146-202ENST00000553929 POGKQ9P215 609 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 ZNF112Q9UJU3 913 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 CFAP45Q9UL16 551 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 DUSP12Q9UNI6 340 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 DMTF1Q9Y222 760 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 PTCH2Q9Y6C5 1203 aa4.77□□□□□ -1.65
LINC01146-202ENST00000553929 DNAJC25-GNG10A0A024R161 153 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 CCDC85CA6NKD9 419 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 BOLA2-SMG1P6H3BVE0 249 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 LINC01387J3KSC0 135 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 M0QX08 132 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 ENC1O14682 589 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 FSCN2O14926 492 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 DKC1O60832 514 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 FBXO24O75426 580 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 KATNA1O75449 491 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 USP2O75604 605 aaPredicted RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 NPTXRO95502 500 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 IFIT1P09914 478 aaKnown RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 EEF2P13639 858 aaKnown RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 CD9P21926 228 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 ATP6V1E1P36543 226 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 NLRP12P59046 1061 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 MPP1Q00013 466 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 HNRNPUQ00839 825 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 BTKQ06187 659 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 ZBTB17Q13105 803 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 AP3B2Q13367 1082 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 MTERF2Q49AM1 385 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 TRAPPC3LQ5T215 181 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 TATDN1Q6P1N9 297 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 LDHAL6AQ6ZMR3 332 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 ILDR2Q71H61 639 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 KRT74Q7RTS7 529 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 DZIP1Q86YF9 867 aaKnown RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 DMRTC2Q8IXT2 367 aaPredicted RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 FAM26EQ8N5C1 309 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 BICD2Q8TD16 824 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 USP33Q8TEY7 942 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 HDAC7Q8WUI4 952 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 CPLX3Q8WVH0 158 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 IPCEF1Q8WWN9 437 aaPredicted RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 SLC7A3Q8WY07 619 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 CCT6BQ92526 530 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 ZNF75CPQ92670 426 aaPredicted RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 DPF3Q92784 378 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 ARHGEF2Q92974 986 aaKnown RBP4.76□□□□□ -1.65
LINC01146-202ENST00000553929 DDX11Q96FC9 970 aa4.76□□□□□ -1.65
LINC01146-202ENST00000553929 TSGA13Q96PP4 275 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms